Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00077 atgaataattcaAGTTTGGGAGGTGGGTTTTTGTCGGGTCCCAGTGGGGGTATATTGGACCTGGAATCTCCATTTCATCGACACCAACAGACCCAGTTGAGTCATCCTTCAGTAACGAGTCAGCACCACATTAATATGATGGGTGGTCTGGAAAGTGATCGCCACCCAATTGGGCTAATGGAAGTGAAAGGCTCAAATGCAACATTGAATTTTGGTAAAGGAAAGGCAATTGCTCCTTCAAATCCCACCAACAGTAATGATTTGAGTGAAGAGGATGAGCCAAGTTATGCAGAAGATGGAAATTGTGAGAACTTCGATGATGGTAAGAGCAAAAAGGGATCTCCTTGGCAGCGAATGAAGTGGACGGATAATGTGGTTAGGCTTCTTATAGGAGTGGTGGCTTGCGTGGGAGACGATGGTACAATTGATGCCATGGATGGTCTTAAAAGGAAATCTGGAATTTTGCAAAAGAAGGGCAAGTGGAAAACGGTCTCCAAAATAATGATAAGCAAGGGCTGCCACGTTTCACCCCAGCAGTGTGAGGATAAGTTTAATGATCTAAATAAGAGGTACAAAAGGTTAAATGATATACTTGGAAGGGGAACCAGTTGTAGAGTGTTTGAGAACCCCGCATTGTTGGATTCTATGCCCAACCTGTCAGCTAAGGCGAAGGATGATGTCAGAAAGATCTTGAGCTCTAAACACTTGTTTTATAAGGAGATGTGTGCCTACCATAATGGGCAAAGGATACCTAATTGCAATGACCTTGATTTACAGGGTTATTCCATGCAACATGGGAGGGACTCGAGGGACAATAATGGCTCAGAAGAGGAAGGTGAGGAAAACACGAATGAAAGTGAGGATGATGAGTTCGATACTGTAGGTAATAGAAATGCTCCTAGGGGTGGAGAGGGGATGGAGGAGTTATGTGatacaaagaaattaagtgAGGAGGATGGTGATTTCTTGCTGCAGTCTTTTGGGCTGGACAAATTTGAAGCTGAAATGGCTAGGATTTTTCAAGACCCTACTAAGTCATTGTGGGAACGAAGAGAATGGCTTAAGATGCAGGTGAGGCAGCTCCAAGAGCAAAGTGTCAACTACCAAGCTCAAGCTCTTGAACTTGAGAAGCAACGTTTTAAGTGGCTAAGATACTGCAGCAAGAAGAACAGGGAGCTGGAGAGGTTGAGGTTGGAGAATGAGAGGATGAAATTGGAAAATGAGCGCAAGATCTTGCAACTGAAGCAGAAGGAGCTTGAGACAGATTTAAGGAGGTCTGAGATGTCCACAGACCCTGCCTCTTTAGGAATTGAGAGGCTGCAAGCGAGGGATATCAACTTGGGCAGACAGCAGTA 1355 0.4391 MNNSSLGGGFLSGPSGGILDLESPFHRHQQTQLSHPSVTSQHHINMMGGLESDRHPIGLMEVKGSNATLNFGKGKAIAPSNPTNSNDLSEEDEPSYAEDGNCENFDDGKSKKGSPWQRMKWTDNVVRLLIGVVACVGDDGTIDAMDGLKRKSGILQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTSCRVFENPALLDSMPNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNCNDLDLQGYSMQHGRDSRDNNGSEEEGEENTNESEDDEFDTVGNRNAPRGGEGMEELCDTKKLSEEDGDFLLQSFGLDKFEAEMARIFQDPTKSLWERREWLKMQVRQLQEQSVNYQAQALELEKQRFKWLRYCSKKNRELERLRLENERMKLENERKILQLKQKELETDLRRSEMSTDPASLGIERLQARDINLGRQQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00077 451 MobiDBLite consensus disorder prediction 1 40 - -
Bva09g00077 451 MobiDBLite consensus disorder prediction 261 308 - -
Bva09g00077 451 Pfam Myb/SANT-like DNA-binding domain 118 209 IPR044822 -
Bva09g00077 451 PANTHER F16F4.11 PROTEIN-RELATED 12 426 - -
Bva09g00077 451 MobiDBLite consensus disorder prediction 73 114 - -
Bva09g00077 451 Coils Coil 351 378 - -
Bva09g00077 451 MobiDBLite consensus disorder prediction 25 40 - -
Bva09g00077 451 Gene3D - 121 193 - -
Bva09g00077 451 Coils Coil 386 422 - -
Bva09g00077 451 PANTHER TRANSCRIPTION FACTOR TRIHELIX FAMILY-RELATED 12 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00077 Bva-Chr9 368084 370307 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva09g00077 Myb_DNA-bind_4 5.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00077 - - ccaj:109806698 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00077 09 368084 370307 Bva09g00077 09 368084 370307 ECH