Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00073 atggaCCATGACAAGACTGGATGCCAAGCTCCCCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTTGGTAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAACAGGCCAAGCTTGCTGCATCGTCCATTGGAAATATTATGAATGGGTCATCAAGCAGCAGTGGAAATGAACCTGTTGTTGCTGCCAATGTGGATATCGCAACCAATTCAGTAGAGCGTAAAACTATCTCCGTGCAACCTTTATTTGCTTCAGGCTTAGAGGAGAGTGGTGAGGCAAAGCCGAAGGATGGTCCAAAACGCTGCAGTAACTGCAACAAGCGGGTTGGTTTGACAGGGTTCAATTGTCGATGCGGTAATCTTTTCTGTGCTGTACATCGCTACTCTGACAAACATAACTGCCCGTTTGATTACCGCACCGCTGCTCGGGATGCCATAGCTAAAGCAAATCCAGTTGTCAAAGCTGAGAAGCTTGATAAAATCTA 518 0.4556 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSIGNIMNGSSSSSGNEPVVAANVDIATNSVERKTISVQPLFASGLEESGEAKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00073 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Bva09g00073 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Bva09g00073 172 SUPERFAMILY AN1-like Zinc finger 99 167 IPR035896 -
Bva09g00073 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Bva09g00073 172 Gene3D - 4 69 - -
Bva09g00073 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 172 - -
Bva09g00073 172 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 172 - -
Bva09g00073 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Bva09g00073 172 Gene3D - 95 168 IPR035896 -
Bva09g00073 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Bva09g00073 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Bva09g00073 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00073 Bva-Chr9 348872 351576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00073 8 172 C2H2 Transcription Factor Family AT3G52800 43.353 1.03e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00073 - - gmx:100802969 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00073 09 348872 351576 Bva09g00073 09 348872 351576 ECH
Bva09g00073 09 348872 351576 Bva07g02564 07 20332662 20336245 ECH
Bva04g02212 04 21183581 21185605 Bva09g00073 09 348872 351576 ECH
Bva13g02367 13 17963582 17965492 Bva09g00073 09 348872 351576 ECH