Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00071 ATGAACTCAAACAACTGGCTTTCCTTCCCTCTTTCCCCAACTCATGCTTCCTTACCGGCACATCTCCAAGCTACTCAATCCCATCAGTTTTCACTTGGCTTAGTCAACGACAACATGGAGAGCTCTTTCCAAAATCATGcaGACTGGAATCTGATCAATAGCCACAGCAGCAACGAAGTTCCGAAGGTTGCAGATTTTCTAGGCGTGAGCAAATCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCAGTCAAATGATTCAGACTACCTATTTACAAACAATAGTCTGGTGCCGATGCAAAGCTCAGTGTTAGCTACATCTACTAACTACGAACACCAAGAAAATGCTAACAGTAATTTGCAGTCCTTGACATTGTCTATGGGTAGCGGCACAAAGGATTCGACGTGTGAGACCAGTGGCGACAACAGCACAAACACTGTCGAAGCTGCTCCCAGAAGGACTTTGGATACCTTTGGCCAGAGAACATCAATATATCGCGGTGTAACAAGaCATAGGTGGACTGGGAGGTATGAAGCTCATCTTTGGGATAATAGCTGCAGAAGGGAAGGGCAGTCAAGAAAAGGTCGCCAAGGTGGGTAtgataaagaagagaaagctgCTAGGGCCTATGATTTAGCTGCACTAAAGTACTGGGGAACATCCACCACAACCAACTTCCCAATCAGTAACTATGAGAAGGAATTAGAGGAAATGAAGCACATGACTAGACAAGAATTTGTGGCCGCCATAAGGAGGAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACTAGGCATCATCAGCATGGAAGATGGCAAGCAAGGATTGGCAGAGTCGCGGGGAACAAGGATCTTTACTTAGGAACTTTTAGTACTGAGGAAGAAGCTGCAGAAGCTTATGACATAGCGGCTATCAAGTTTAGAGGTCTTAACGCAGTGACCAACTTTGACATGAGTCGTTATGATGTGAAAGCCATTCTTGAAAGCAACACGCTCCCAATAGGAGGAGGAGCTGCTAAACGTCTTAAGGAGGCTCAAGCTCTGGAATCTTCTAGAAAACGGGAAGAAATGATAGCTCTTGGCTCCAGCTTCCAATATGGAGGATCCTCTAGTTCTAGCAGGTTGCAGGCATACCCTCTGATGCAGCAACAGTTTGATCAACATCAACCTTTACTAACTCTGCAAAACCAAGATATTTCTCATCAGTACTCTCAGGACCCTTCTTTTCAACAGAGTTATATTCAAACCCAATTGCAGTTGCACCAGCAAAGTGGTTCTTACATTCACCAATCAGCTCAGAATGCTCACTTATACAACAGCTACCTTCAGAACCATCCAGCTCTGCTTCAGGGATTGATGAACATGGGGTCGTCTTCTTCATCTGTGCTTGAGAATAATGGTGGGTCGAGTACTGGGGGTTTCGATGGAGCTTTCATTGGGAATGGGCTTGGGATGACTTCCAATACGACGTCGGGGAATGCAGGGCTGGTTAAGGTTGATTATGACATGCCTTCCGGGGGTTATGGGGGCTGGTCGGCGGCGGACACCATGCAAGGATCAAATCCAGGTGTTTTTACAATGTGGAATGATTG 1610 0.4534 MNSNNWLSFPLSPTHASLPAHLQATQSHQFSLGLVNDNMESSFQNHADWNLINSHSSNEVPKVADFLGVSKSENQSDLAAFNEIQSNDSDYLFTNNSLVPMQSSVLATSTNYEHQENANSNLQSLTLSMGSGTKDSTCETSGDNSTNTVEAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSSFQYGGSSSSSRLQAYPLMQQQFDQHQPLLTLQNQDISHQYSQDPSFQQSYIQTQLQLHQQSGSYIHQSAQNAHLYNSYLQNHPALLQGLMNMGSSSSSVLENNGGSSTGGFDGAFIGNGLGMTSNTTSGNAGLVKVDYDMPSGGYGGWSAADTMQGSNPGVFTMWND 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00071 536 CDD AP2 165 231 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 PRINTS Ethylene responsive element binding protein signature 305 325 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 ProSiteProfiles AP2/ERF domain profile. 166 229 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 ProSiteProfiles AP2/ERF domain profile. 265 323 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 CDD AP2 264 325 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 535 - -
Bva09g00071 536 SMART rav1_2 166 235 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 SMART rav1_2 265 329 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 Pfam AP2 domain 266 315 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 Pfam AP2 domain 166 221 IPR001471 GO:0003700|GO:0006355
Bva09g00071 536 SUPERFAMILY DNA-binding domain 165 231 IPR016177 GO:0003677
Bva09g00071 536 Gene3D AP2/ERF domain 265 325 IPR036955 GO:0003700|GO:0006355
Bva09g00071 536 Gene3D AP2/ERF domain 166 231 IPR036955 GO:0003700|GO:0006355
Bva09g00071 536 SUPERFAMILY DNA-binding domain 264 325 IPR016177 GO:0003677
Bva09g00071 536 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 4 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00071 Bva-Chr9 342070 344639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00071 1 536 AP2-EREBP Transcription Factor Family AT1G51190 64.516 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Bva09g00071 AP2 2.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00071 K09285 - pvy:116115844 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00071 09 342070 344639 Bva09g00071 09 342070 344639 ECH