Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00070 ATGGATATAGATACTGCAAGTAGACCGTCGCCGGAGTTTGACATAAACAGGCTGAGAGCACTCAAAGTCTTAGGCAAGGGTGCCATGGGTACAGTCTTCCTGGTCCACGACACCTTGGCTGATGGGTCTGCCCGCTACCCGTTCGCTTTGAAGGTGATGGAGAAATCCTCCATCAGCGCGAAGCTGGACGCTGACCGACGTGCCCGGTGGGAAATCCAGGTGCTGAGCAGCTTCTCCCACCCATTTCTTCCTTCCCTTTTAGGGACATTGGAGACCGACCAGTTACTGGGTTGGGCCATCCCTTATTGCCCAGGTGGCGACCTCAATGTCCTCCGTTATCGTCAAACTGACCGTGTCTTCTCTCCCGCCGTCATTCGCTTCTATTTGGCTGAGATAGTCTGCGCTCTCGAACACCTCCATAGCAGGGGCATCGCATATCGCGATTTGAAGCCCGAGAACATTCTCATTCAACAATCTGGTCATGTCATCCTTACGGACTTCGATCTCTCTCGTAAACTATCGCCCAAAACcatcaaaatcttcatttCAACAATAACCCAGTTTGAAGACCCGCCGTTGCCGGAAACACGCCGTAAAAATCACTCGTATTTTACTCGGTGGTTCCCCGTCCCACCTCACATTCGTCAAAACAGAAAGGGGTTGAAGAAGGCCAAGTCTGCTAGAGTCAGCCCGGTAAGTCGACGCAAACCGAGTTTCTCCAGTGTTGAGCGGTCTAACTCGTTCGTCGGCACCGAAGAGTACGTCTCACCTGAAGTTGTCCGCGGCGACGGTCACGAGTTCGCCGTGGATTGGTGGGCTTTGGGAATATTAACGTACGAGATGCTATATGGCACGACACCGTTTAAGGGgaagaacagaaaagaaaCGTTTCGAAACGTTCTGGCGAAGGCACCGGAGTTTATAGGGAAGAGAACGGCGTTAACGGACTTGATCGGACGGTTGTTAGAAAAGGACCCCACAAAGCGATTGGGCTACGTCCGAGGCGCGAGCGAGATCAAGGGGCACGAATTCTTCAAAGGGGTAAAGTGGGACCTATTAACGGAGGTAGTAAGGCCGCCGTTCATTCCGTCAAGGGAGGATGGGGGATTTACGGAGCAGTTTAATACGGGCGGCGTGGACATAAGGGATTACTTGCAGAGCTTGAAATCGCCGCCGTCGTTGCCACCTTCGCCGTTAGCGTCACCGCGTACGGAGCACGAGAGGAATATTTCATTAACAGAATTCTG 1247 0.5156 MDIDTASRPSPEFDINRLRALKVLGKGAMGTVFLVHDTLADGSARYPFALKVMEKSSISAKLDADRRARWEIQVLSSFSHPFLPSLLGTLETDQLLGWAIPYCPGGDLNVLRYRQTDRVFSPAVIRFYLAEIVCALEHLHSRGIAYRDLKPENILIQQSGHVILTDFDLSRKLSPKTIKIFISTITQFEDPPLPETRRKNHSYFTRWFPVPPHIRQNRKGLKKAKSARVSPVSRRKPSFSSVERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLAKAPEFIGKRTALTDLIGRLLEKDPTKRLGYVRGASEIKGHEFFKGVKWDLLTEVVRPPFIPSREDGGFTEQFNTGGVDIRDYLQSLKSPPSLPPSPLASPRTEHERNISLTEF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00070 415 MobiDBLite consensus disorder prediction 391 415 - -
Bva09g00070 415 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 13 392 - -
Bva09g00070 415 PANTHER FLIPPASE KINASE 1-RELATED 13 392 - -
Bva09g00070 415 Pfam Protein kinase domain 243 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00070 415 Pfam Protein kinase domain 21 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00070 415 SMART serkin_6 18 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00070 415 Gene3D Phosphorylase Kinase; domain 1 365 375 - -
Bva09g00070 415 ProSiteProfiles AGC-kinase C-terminal domain profile. 346 415 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva09g00070 415 ProSiteProfiles Protein kinase domain profile. 18 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva09g00070 415 Gene3D Transferase(Phosphotransferase) domain 1 107 177 - -
Bva09g00070 415 Gene3D Phosphorylase Kinase; domain 1 19 106 - -
Bva09g00070 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Bva09g00070 415 Gene3D Transferase(Phosphotransferase) domain 1 242 364 - -
Bva09g00070 415 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Bva09g00070 415 SUPERFAMILY Protein kinase-like (PK-like) 15 388 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00070 Bva-Chr9 331793 333345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00070 13 415 AGC Kinase Gene Family AT3G20830 60.636 5.92e-165 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva09g00070 Pkinase 9.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00070 - K08286 jre:108998699 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00070 09 331793 333345 Bva07g02565 07 20341319 20342933 BWGD
Bva09g00070 09 331793 333345 Bva09g00070 09 331793 333345 ECH