Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00066 atggaGTCAGATCTTCAGCAACGCTATCCCATATTCAATGATCATcatcagcagcagcagcagcaggtGAATTCAAGCTTGACACGTTATCGATCGGCACCAAGTTCTTACTTTACCAACATCATTGACAAGGAGTTCTATGAGGACATTTTTAATCGCCCTTCAAGTCCTGAAACAGAGCGAGTGATTTCACGGTTCATGAATAGCATTAGCGGTGGCGCCACAGAAGATTCACTTGCTCAAAATCTTTCACCTGTTCGACAAAATTCTGCAGTGAAGGAAGAGATCGATCAGCAGGGGCAGGTTATATCGTCCATGAATAATGAAACCGTGGTTCTTCAGCAGCAGaacaatatcaataattatagcTCTGCTCCTCAAAATTTTTACCAAAGCTCAGGACGACCACCTTTGCCAAATCAGAACATGACGTCAGCTATGGAAGGAACATATTCTTTCGTAACAAATCGGCTGCCGCAGATGAAGGCTGGTGGTGGAAATTCTAATCTTATCAGACATAGTAGCTCACCTGCTGGGCTTTTTAAGCAGATAGACGTTGAAAACaGCTTAGCTGCTATCAGAGGCATGGGAGCTTTTGGAGCTGGTAATAACACTAATGAAGAAGCAAACTTTTCTCCTGCGACGGGGTTGAAGAAGCAGCCAAGCTACTCATCAGGGCTTATGACTTCTATAGCTGAAATTGGAGACAGAACCAATAGAGAAAGCAATCCAGAAAATGAAGGTTTTGCGGAAAGCCATGGTAATGAATTCATCACAGGTTTCCCAGTAGGTCCTTGGGATGATGCTACAATCATGTCTGACAATGTTACTGGTCTAAAAAGATTAAGAGATGATgatgcaaaaatattttctagctTAAATGCAGCTGAAACTCAGAATGAGACAGGAAACCAGCCTGCTGCTCCTTTGGCTCATCACTTAAGTTTGCCAAAAACTTCAGCAGAAATGGCAGCAATTGAAAAGTTTCTGCAGTTCCCTGATTCTGTCCCGTGTAAAATTCGTGCCAAGCGAGGTTGTGCCACTCACCCAAGAAGCATTGCGGAGAGGGTTAGAAGAACCAAAATTAGTGAGCGTATGAGGAAACTACAAGATCTGGTCCCGAACATGGACAAGCAAACAAACACAGCGGACATGTTGGACTTGGCTGTTGAGTACATCAAAGATCTTCAAAAGCAGGTTCAGACGCTTTCAGATAGTCACTCGAAATGCACGTGTTCACACAAGCAGCCGCAATA 1256 0.414 MESDLQQRYPIFNDHHQQQQQQVNSSLTRYRSAPSSYFTNIIDKEFYEDIFNRPSSPETERVISRFMNSISGGATEDSLAQNLSPVRQNSAVKEEIDQQGQVISSMNNETVVLQQQNNINNYSSAPQNFYQSSGRPPLPNQNMTSAMEGTYSFVTNRLPQMKAGGGNSNLIRHSSSPAGLFKQIDVENSLAAIRGMGAFGAGNNTNEEANFSPATGLKKQPSYSSGLMTSIAEIGDRTNRESNPENEGFAESHGNEFITGFPVGPWDDATIMSDNVTGLKRLRDDDAKIFSSLNAAETQNETGNQPAAPLAHHLSLPKTSAEMAAIEKFLQFPDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQKQVQTLSDSHSKCTCSHKQPQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00066 418 MobiDBLite consensus disorder prediction 236 255 - -
Bva09g00066 418 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 14 415 - -
Bva09g00066 418 SMART finulus 352 402 IPR011598 GO:0046983
Bva09g00066 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 396 IPR011598 GO:0046983
Bva09g00066 418 Gene3D - 347 416 IPR036638 GO:0046983
Bva09g00066 418 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 14 415 - -
Bva09g00066 418 Pfam Helix-loop-helix DNA-binding domain 351 397 IPR011598 GO:0046983
Bva09g00066 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 349 410 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00066 Bva-Chr9 307848 311021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00066 1 413 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 40.047 1.36e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva09g00066 HLH 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00066 - - gmx:100803833 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00066 09 307848 311021 Bva09g00066 09 307848 311021 ECH
Bva09g00066 09 307848 311021 Bva07g02568 07 20357037 20360210 ECH
Bva04g02222 04 21230932 21233798 Bva09g00066 09 307848 311021 ECH
Bva13g02355 13 17900852 17903192 Bva09g00066 09 307848 311021 ECH