Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00034 ATGGCCTATATGTGTGCTGACAGTGGCAACCTGATGGAGATTGCCCAGCAAGTCATTAAGCAAAAGCAGCAACGGGAGCAACAGCAGCAAAATCACCACCAGCAACAGCAACACCTTCTTGGTATCAATCCCCTCTCTTTCCACCCTTGGAATAACGCTCCCTCTTTGGGATATGGCCTCCCCGCCGCTGACTTCTCGGATCTCTTTCAATTCGGCCCGGGTCCCGACAAATCCGAACCCGGCTTCCAGTTTCCTTACTTGGACCACCACTGTACTGGCTTGAGGTTCTCAGATTTCGCCGGCGATGCTGCCGGTACTTGTGCTCCCGCTGAGTTCGGCTTGGACGAGTGGATGGATAGTTTAATGGGCGGTGGCGATTCAACGGATGGTTCCAATCTCCCATCTGCGTGTGACGCGTGGCACAACAATGGCGATTTTGGTCTCTACGCCTCCATGCCCATTACTACTTTCGCAGTCCGTCTCTCTCCCCCGTCGGATCTTAACCAGGTTATTTTCTCGTCATCGGATTGTCAACTGAGTCTTAAACCGAGACAAGCACAGGTGCCAACTACATGGACATCACCACCATCTTCCTCTCCACCCACCTTGGTCAAAGACCCACCAAATTCACCACCACCGCCACCggcagcaacaacaacaacaacaacgaCGATTTTGCGCACAGACGACACTGTACGTGGTTGTTCCTCTAGTTTAACTGAACCCGAGCCTACGCCGCCGCTTCTAAAAGCCTTAATTGAGTGTGCCCGACTTGCCGAAATAGAACCAGATCATGCCATGAAATCACTTATTCAGCTGAAGAAATCGGTGTCCCAACACGGTGATCCTACTGAAAGAGTAGCCTTCTACTTCTCCGAAGCTCTGGGTGGCAGATTTTCACTAGAAACGAAAGAGAAGAACTTGGCAATGCTGGAGACTACTTCTGAGGAGTTCACACTCTATTACAAAGCTCTCAACGATGCTTGTCCTTATTCCAAGTTTGCTCATTTAACGGCGAACCAAGCTATACTGGAAGCCACTGGAGGAGCCACCAAGATCCACATCGTAGATTTTGGGATTGTTCAGGGAGTTCAATGGGCAGCGTTGCTCCAAGCTTTCGCAACTCGCTCCACTGGAAAACCCACTAGCATTCGGATCACTGGGATACCAGCCATGACGCTTGGACCTTCTCCTGGGTCGTTACTTTGGGCCACCGGGAATCGCCTCTCTGAGTTTGCAAAGCTTCTCGAATTGGATTTTGAGTTCAAACCGATTCTAACACCAATTCACGAGCTTGACGAATCCAGCTTCGGTGTTGAACTGGATGAAGCTCTGGCAGTGAACTTCATGCTTCAATTGTTTAATCTCTTGGATGAGCCACCCATATTTCAATCGCTGGAGCCAAACTTCGCCCGAGACTCGCCAGAGAGGCTCCAACTGGAGAGGATTCTTTTTGGCTGGAGAATTGCCACCGTGATTGGATCAGATCCATCTGGGATTGTAAGAGAACGGATGGAAGATAAAGAGCAGTGGCGGGTTTTGATGGAAAGTTCGGGTTCTGAATCAGTGAATCTCGGCCATTATGCAATTAGCCAAGCTAAGATCCTTCTATGGAATTACAATTACAGTTCTCTGTATTCCCTTGTTGAATCTCAACCTGGGTTTGTGTCTCTGGCTTGGAATGATGTTCCTTTGTTGACAGTTTCTTCATGGCGTTA 1718 0.4866 MPITTFAVRLSPPSDLNQVIFSSSDCQLSLKPRQAQVPTTWTSPPSSSPPTLVKDPPNSPPPPPAATTTTTTTILRTDDTVRGCSSSLTEPEPTPPLLKALIECARLAEIEPDHAMKSLIQLKKSVSQHGDPTERVAFYFSEALGGRFSLETKEKNLAMLETTSEEFTLYYKALNDACPYSKFAHLTANQAILEATGGATKIHIVDFGIVQGVQWAALLQAFATRSTGKPTSIRITGIPAMTLGPSPGSLLWATGNRLSEFAKLLELDFEFKPILTPIHELDESSFGVELDEALAVNFMLQLFNLLDEPPIFQSLEPNFARDSPERLQLERILFGWRIATVIGSDPSGIVRERMEDKEQWRVLMESSGSESVNLGHYAISQAKILLWNYNYSSLYSLVESQPGFVSLAWNDVPLLTVSSWR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00034 421 Pfam GRAS domain family 98 309 IPR005202 -
Bva09g00034 421 Pfam GRAS domain family 311 421 IPR005202 -
Bva09g00034 421 MobiDBLite consensus disorder prediction 43 67 - -
Bva09g00034 421 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 311 420 - -
Bva09g00034 421 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 98 317 - -
Bva09g00034 421 MobiDBLite consensus disorder prediction 31 72 - -
Bva09g00034 421 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 311 420 IPR005202 -
Bva09g00034 421 ProSiteProfiles GRAS family profile. 88 421 IPR005202 -
Bva09g00034 421 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 98 317 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00034 Bva-Chr9 173198 175309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00034 95 421 GRAS Transcription Factor Family AT5G66770 58.333 3.59e-146 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva09g00034 GRAS 2e-57 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00034 - - adu:107477343 501.516