Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva09g00020 | ATGGTAAACCCAAAGGTGTCTACTCGCCCAACAATATGCTACAGGCCTATACGACCTTCTGACTTTGACATTTTAGAGCATATTCATGGTAATCTATTTCCCATCAGGTACGAATCTACTTTTTTCCAAGATGTGGTAAATGGGCGAGATATTGTGTCATGGGGCGCTGTTGATCGTAGTCGCCCTGATGGTACAAGTGATGAACTCATTGGATTTGTAACAGCACGAATTGTTCATGCAAGAGAAAGTGAGATAGTGGATATGATTGGATATGACTCATCCGAGACTGATCCAACTTTAGTCTACATTCTGACGCTGGGAGTAGTGGAAACATATAGAAATCTTGGAATAGCTTCTTCACTGATTCGGGAGGTCATAAAATACTCTTCAAGTATTCCAACTTGCCGAGCTGTTTATTTGCATATTGGagtagattttaattttactcttgATGCGTGTGTTTCTCttgttttattccttttttccaGAATAGTAATTTTCAGTTCACGTTTCAGAGAGCTTCTGACTGCAATAGTAAGCTACATGAGAAGTGGCTTTAAGTCAGTAACTGCAAGACTGTACAAGAATGAAGAGAGGAAGATTACAAGGTGGgcaaaatgcaaagaaaatcaTTCTCTTATTTCAACAACGCATAAGAGAAACCTTGCTGTCGAGTGTACTGGATATGAgtgtgtttg | 698 | 0.3639 | MVNPKVSTRPTICYRPIRPSDFDILEHIHGNLFPIRYESTFFQDVVNGRDIVSWGAVDRSRPDGTSDELIGFVTARIVHARESEIVDMIGYDSSETDPTLVYILTLGVVETYRNLGIASSLIREVIKYSSSIPTCRAVYLHIGVDFNFTLDACVSLVLFLFSRIVIFSSRFRELLTAIVSYMRSGFKSVTARLYKNEERKITRWAKCKENHSLISTTHKRNLAVECTGYECV | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva09g00020 | 232 | PANTHER | N-ALPHA-ACETYLTRANSFERASE 60 | 165 | 226 | IPR045141 | GO:0004596 | |
| Bva09g00020 | 232 | PANTHER | BNAC09G41050D PROTEIN | 1 | 143 | - | - | |
| Bva09g00020 | 232 | PANTHER | BNAC09G41050D PROTEIN | 165 | 226 | - | - | |
| Bva09g00020 | 232 | PANTHER | N-ALPHA-ACETYLTRANSFERASE 60 | 1 | 143 | IPR045141 | GO:0004596 | |
| Bva09g00020 | 232 | Pfam | Acetyltransferase (GNAT) family | 63 | 147 | IPR000182 | GO:0016407 | |
| Bva09g00020 | 232 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 12 | 210 | IPR000182 | GO:0016407 | |
| Bva09g00020 | 232 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 8 | 145 | IPR016181 | - | |
| Bva09g00020 | 232 | CDD | NAT_SF | 77 | 141 | - | - | |
| Bva09g00020 | 232 | Gene3D | - | 4 | 149 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva09g00020 | Bva-Chr9 | 121015 | 123141 | Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | GNAT | Bva09g00020 | Acetyltransf_1 | 2.1e-07 | CL0257 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva09g00020 | K22767 | - | gmx:100812509 | 320.472 |