Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00014 ATGTATCCATTCCATCTTGCTAATGCTAATGGTTCCCTCcttcaacaatatatatatgtaatgatGATGCGTTCTGCAGAGAGCTCCTCTTCCTCTGCTACTGCTACTGATGAATCCAAGAATATTAATTCAAGATCAGTTGGTGTATGGTTGAGCTTGAATTATCCGAGTCCCAGTCCGATTCCTGCTGCTCCAAAATCTTATCAGTGCTCACTCTGCAGTAGGAGCTTCCTCTCTGTGCAAGCCTTAGGAGGCCATCAAAATGCTCATCGCAAAGAGAAAAACGCCATGCACAAGATGTACATGGACATTTTAAGAAACCTCAAACACCAACACCAACACCCTCCTCGCGATCATCATCTTGTTCACTCTACTCCCCATGCGACGTCGTCTCTGCAGCCCATCCCACCTCATCACCAACCTGAAATCGATCTAGACTTGGCACTCAGCTGTGGACCTTCCTCTCCAAAGCTCAAATACTATCACTTCATATG 494 0.4413 MYPFHLANANGSLLQQYIYVMMMRSAESSSSSATATDESKNINSRSVGVWLSLNYPSPSPIPAAPKSYQCSLCSRSFLSVQALGGHQNAHRKEKNAMHKMYMDILRNLKHQHQHPPRDHHLVHSTPHATSSLQPIPPHHQPEIDLDLALSCGPSSPKLKYYHFI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00014 164 Gene3D Classic Zinc Finger 58 127 - -
Bva09g00014 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 95 IPR013087 -
Bva09g00014 164 Pfam C2H2-type zinc finger 68 93 - -
Bva09g00014 164 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Bva09g00014 164 MobiDBLite consensus disorder prediction 114 133 - -
Bva09g00014 164 PANTHER ZINC FINGER PROTEIN JAGGED 27 140 IPR045320 GO:0003700
Bva09g00014 164 SUPERFAMILY beta-beta-alpha zinc fingers 65 96 IPR036236 -
Bva09g00014 164 PANTHER OS02G0182300 PROTEIN 27 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00014 Bva-Chr9 102002 102496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00014 66 139 C2H2 Transcription Factor Family AT1G67030 40.260 1.32e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00014 - - cpap:110811693 65.855