Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00010 ATGGCAACCAGCAGCAGCTCACGAGTTATAACATGCAAAgCTGCTGTGTGTTGGGGGATAGGAGAGAGTGTGAAGATTGAAGAGATACAAGTAGAGGCTCCCAAGGAATCTGAAGTTCGAGTTAAGATGCTTTGTGCCAGTCTCTGCCATACAGATATATCCAGCACTCGAGGATTCCCACAGACTAATTTTCCTCAAGTACTAGGCCACGAAGGAGTTGGTGTAGTAGAAAGCGTGGGAGAGAATGTAAGCACTGTGAAAGCAGGGGATGTTGTGATCCCAACATACATTGGGGAGTGCGGAGAATGTGAGAATTGCGTTTCGGGAAAAAGTAACCTGTGCCTGAGATACCCTCTGAGCTTGACTGGTTTAATGCCCGATAACACTTCCAGAATGTCCGTTGGGGGCCACAAGCTGTACCATGTTTTCAGTTGTGCCACGTGGAGTGAGTACGCGGTTATTCATTCCGGCTATCTTGTGAAAGTTGATCCAACCATTGATCTTGCTCATGCTAGCTTCATCTCGTGTGGCTTCTCAACTGGTTTTGGTGCTGCTTGGAAGGAAGCTCGGCTTGAAACCGGCTCGAGTGTCGTCGTTTTTGGTCTCGGAGCTGTTGGATTAGGGGTTATAAGCGGAGCCAAAATGTTGGGGGCAACCAACATAATTGGAGTTGATATAAACAATATGAAGAAAGCCAAGGGTGAGGTTTTTGGAATGACTCATTTTATAAATCCCAGTGAATGTGAATCGGAAAAATTGATAAAGGACTTGAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGTACTGGAGTTGCCTCTTTGCTTTCTCAAGCCATAGAAGCCACGAAAGTGGGAAAAGGAAAGACGATTGCCATCGGCACTGGAACTGAAGCTCTAGGTCCCATCAATTTTGCTGCTCTTATGATGGGGAGAACTGTCAAGGGTTCTATTTTTGGAGGGATAAAACCCATGTCTGACCTTTCCATTCTGGCTCAGAAATGCCTCAAAAAAGAAATCCCTTTCGATGAACTTTTCACCCATCAGCTGCCATTGCAAGATATAAACAAAGCATTTGAGCTATCAAAACAGCCAGATTGTGTCAAAATTGTTATCAAGATGTG 1124 0.4502 MATSSSSRVITCKAAVCWGIGESVKIEEIQVEAPKESEVRVKMLCASLCHTDISSTRGFPQTNFPQVLGHEGVGVVESVGENVSTVKAGDVVIPTYIGECGECENCVSGKSNLCLRYPLSLTGLMPDNTSRMSVGGHKLYHVFSCATWSEYAVIHSGYLVKVDPTIDLAHASFISCGFSTGFGAAWKEARLETGSSVVVFGLGAVGLGVISGAKMLGATNIIGVDINNMKKAKGEVFGMTHFINPSECESEKLIKDLSGGMGVDYSFECTGVASLLSQAIEATKVGKGKTIAIGTGTEALGPINFAALMMGRTVKGSIFGGIKPMSDLSILAQKCLKKEIPFDELFTHQLPLQDINKAFELSKQPDCVKIVIKM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00010 374 SUPERFAMILY GroES-like 326 372 IPR011032 -
Bva09g00010 374 CDD liver_alcohol_DH_like 10 373 - -
Bva09g00010 374 Pfam Alcohol dehydrogenase GroES-like domain 37 162 IPR013154 -
Bva09g00010 374 Gene3D - 181 317 - -
Bva09g00010 374 PANTHER ALCOHOL DEHYDROGENASE 7 373 - -
Bva09g00010 374 Pfam Zinc-binding dehydrogenase 204 325 IPR013149 -
Bva09g00010 374 SUPERFAMILY GroES-like 7 193 IPR011032 -
Bva09g00010 374 PANTHER ALCOHOL DEHYDROGENASE-RELATED 7 373 - -
Bva09g00010 374 Gene3D - 16 369 - -
Bva09g00010 374 SMART PKS_ER_names_mod 19 372 IPR020843 GO:0016491
Bva09g00010 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Bva09g00010 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 336 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00010 Bva-Chr9 86591 88362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00010 32 176 Monolignol Biosynthesis Gene Families AT4G37980 31.973 4.75e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00010 K00121 - gmx:100798341 511.916