Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00005 ATGACTCCCTACTTTTGGGCCATTCGTCAAAGATGTAGGAACCAATTTCACAGAATCACAAAGACACTTCCTTCCCTCCCTTATCGCGTCATTTATAAACCTAAATCCatcccttttcctttctcccTTTCTACAGTCATTCACCCCATTCAAACTGAAGGACCGAGAGTTCTccttcatttctctttctcgtCGAAGTCTCTCCCTCATTCTCGTATAGCCGTGCTTACGCAAGGGAGTAGTGACTGGCGAGTCTTTAATCGATTAGTACACTCTCTTGCTGAAGATACATTTGATGGCAATTACACCTTTTGGAAGTACGTCCATTACACAATGGGGAATTCGTCCTCAGTTTTTCCTGAGCTCCTGTATGATGGGCAAGATTGCATCAACCAACTACAGGGCCAAAATTGCTTCAACGTTATCTTCTTTGCCATATTAGCAAGAGGAACTTTGCTTGTTACAAGCAGGGCAAATTTTATGGCTGCCCCAGGTTCTAGCTTTTTATCTCGGTACGCCTTGCCTTCGCTGTTTGGCATGGGCTCTCCTCAATCTCCTACTTTACGTCATCGCAGGGGATCAAGGCTGATAGTTAGAGCAGATACGGATTGCTATTCTGTCCTTGGGGTTTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGAACCTGGAGCAGAAcagaaatttaaagaaattagcaATGCTTACGAGGTTTTATCAGATGATGAGAAACGATCTATTTACGATAGATATGGAGAGGCTGGGCTTAAAGGTTCTGGTATGGGCATGGGGGACTTCACTAATCCTTTTGATCTGTTTGAGACATTATTCGAGGGAATGAATCGTGGCATGAACCCCAGAGGCTCTTGGAACGGAGCAATTGATGGTGAAGATGAGTATCACAGTCTTGTCTTGAATTTTAAAGAAGCGGTTTTTGGAGTTGAAAAAGAGATAGAGATAAGCCGACTGGAGAGTTGTGGAACATGCAATGGTTCAGGGGCTAAACCAGGGTCTAAGCCATCCAGATGTAGCACTTGTGGAGGTCAAGGAAGGGTTGTCTCATCAACAAGGACACCGTTAGGCATCTTCCAGCAATCCATGACATGCTCTTCATGCAATGGGATTGGAGAAATTTCAACACCTTGTAACACATGTTCTGGGGATGGTCGAGTGAGAAGAACAAAGCGGATAAGTCTGAAAGTCCCAGCAGGTGTGGACTCCGGTAGTCGATTAAGGGTCCGGAAGGAAGGGAATGCCGGAAGACGAGGTGGTTCTCCTGGTGACCTCTTTGTTGTCATTGAAGTGATCCCAGATCCGGTCCTTAAACGTGATGACAACAACATTTTATACACTTGTAAGGTGTCTTACATTGATGCAATCCTGGGGACAACAATCAAGGTTCCTACTGTGGATGGTATGGTGGATTTAAAAATCCCGGCTGGAACCCAACCGAATACAACACTTGTTATGGCAGGGAAAGGTGTTCCCTTGCtgaataaaagagatatgagAGGTGACCAATTAGTTCGCGTGCAAGTTGAAATCCCCAAACGACTGAGCAGTGATGAGAGGAAGCTTATCGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCAACCAGCagaagata 1676 0.4278 MTPYFWAIRQRCRNQFHRITKTLPSLPYRVIYKPKSIPFPFSLSTVIHPIQTEGPRVLLHFSFSSKSLPHSRIAVLTQGSSDWRVFNRLVHSLAEDTFDGNYTFWKYVHYTMGNSSSVFPELLYDGQDCINQLQGQNCFNVIFFAILARGTLLVTSRANFMAAPGSSFLSRYALPSLFGMGSPQSPTLRHRRGSRLIVRADTDCYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFTNPFDLFETLFEGMNRGMNPRGSWNGAIDGEDEYHSLVLNFKEAVFGVEKEIEISRLESCGTCNGSGAKPGSKPSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGIGEISTPCNTCSGDGRVRRTKRISLKVPAGVDSGSRLRVRKEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDNNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAGKGVPLLNKRDMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKTATSRR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00005 558 ProSiteProfiles dnaJ domain profile. 203 267 IPR001623 -
Bva09g00005 558 CDD DnaJ_zf 341 404 IPR001305 GO:0031072|GO:0051082
Bva09g00005 558 Gene3D - 311 446 - -
Bva09g00005 558 Pfam DnaJ C terminal domain 316 531 IPR002939 -
Bva09g00005 558 SUPERFAMILY Chaperone J-domain 199 296 IPR036869 -
Bva09g00005 558 Gene3D DnaJ domain 200 303 IPR036869 -
Bva09g00005 558 Gene3D - 451 558 - -
Bva09g00005 558 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 138 558 - -
Bva09g00005 558 ProSitePatterns Nt-dnaJ domain signature. 244 263 IPR018253 -
Bva09g00005 558 TIGRFAM DnaJ_bact: chaperone protein DnaJ 203 547 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva09g00005 558 CDD DnaJ 203 256 IPR001623 -
Bva09g00005 558 PANTHER BNAA01G34580D PROTEIN 138 558 - -
Bva09g00005 558 ProSiteProfiles Zinc finger CR-type profile. 328 409 IPR001305 GO:0031072|GO:0051082
Bva09g00005 558 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 328 407 IPR036410 -
Bva09g00005 558 SUPERFAMILY HSP40/DnaJ peptide-binding domain 309 462 IPR008971 GO:0006457|GO:0051082
Bva09g00005 558 CDD DnaJ_C 312 534 - -
Bva09g00005 558 PRINTS DnaJ domain signature 223 238 IPR001623 -
Bva09g00005 558 PRINTS DnaJ domain signature 259 278 IPR001623 -
Bva09g00005 558 PRINTS DnaJ domain signature 239 259 IPR001623 -
Bva09g00005 558 PRINTS DnaJ domain signature 205 223 IPR001623 -
Bva09g00005 558 Pfam DnaJ central domain 341 404 IPR001305 GO:0031072|GO:0051082
Bva09g00005 558 Gene3D - 341 404 - -
Bva09g00005 558 SMART dnaj_3 202 259 IPR001623 -
Bva09g00005 558 Pfam DnaJ domain 203 264 IPR001623 -
Bva09g00005 558 Hamap Chaperone protein DnaJ [dnaJ]. 200 554 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva09g00005 558 SUPERFAMILY HSP40/DnaJ peptide-binding domain 456 542 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00005 Bva-Chr9 44587 50736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00005 199 266 C2H2 Transcription Factor Family AT1G74250 42.667 1.46e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00005 K03686 - gmx:100811006 707.983