Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva09g00002 ATGACTCAGAGTGCTGATATGAGACGAGAATCGGGGACTTGTAACGTATGCGCAGCTCCTTGTTCATCTTGCATGCATATTAACCGTGCTCTTATGGAATCAAAAACTGGTGAATTCACTGATGAAAACTGTCGTTTAATGGAGGCTAATCAATCTTCTATGGATGAGGGTGATGCATCTTCTGTTAGGAGTCGAGCTTGTGAAAGCTTGCAACATGCCGTCAGTGAAGCCAGTAACATGCTCAGTGTTAATTCTAGTCATGATTCTCTATCTGAAAATGCTGATAGTAGACAGGCCTTGTCTAATAACTATCAAGGTTCCAAGTGTTTAGAAGTTCTAGATGATTATACTTCTTGTTTAAGTAGGGCCAGTGAGGCAAATTTAGCAAATAGTTGCCATTATAGGAATGCAGACAGAATAAACTTATCTTGTAGGTCTACTTCAGTTAGTTGCTTGGGGGCAGATGTTTCTGGAAGTGCACCATCTGTTGACGTGCCTAGCTTTTCAGAGATTCCCTCTTATAAAGATGTTGACACAGACCTTAGCTCACCTAAGATTCAAAGTCCGTGCACACAATCTCTTTTAAGTATTCCAAGTATAATGGATCTGAAAAAGGATTCATCTTCTCACATCCCCAAAAAATTGTCCGAATGCTCTTTAGAATTTATTGATCAATCATCAACCAAAGAGGCAGCACCTACTGCTGTTTTTGGTGAGAAATCTTTACCAGATAAGAATAGCCTTATTGATTGTACTGCCAAGGTTTCAGAAAACATACATCAAAACTTAGAAACTAGTACTGACAATGATGTTGGCGGTGCTACAGAAGAAACTGTTAAATGTTCAGTCTCAGGTAAGCAAGATGAGAGGTCTGATGAGCTGGTTGAATCACCTGAGGTTGACATGCAGGAGCATCAATCTGAAGATGAGAGTGACAAATCAGATATCGTGGAACATGATGTAAAAGTGTGTGATATCTGTGGAGATGCTGGTCGGGAGGATCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCTGAACACACcTACTGCATGCGAGAAATGCTTCGGAAGGTCCCTGAAGGAAATTGGTTATGTGAAGAATGCAAATATGTAGAAGCAACTGAAAATCAGAGGCTAGAGGAGACTGAAAACCAGAGGCTTGGTAAGAGTGAAGTCAcgcttgaaattgaaaaagGTGgcgaagaaagaaaactcaatAAACTTGGTTACACTTCACAAATCTCTGCAAAGAGGCATTCTGAAAATATTGGAATAACCCCAGCAGCAAAAAGGCAGGCTGTTGAATCAAGCACAGGATCTCCAAAGCCATCAAGCCCCAAAAGATTAGTTTCTCTGTCACGGGAATCTTCATTTAAGAGTCCAGATAAAGGAAAAGTGAAGCCTAGTAATCAGTTGTCTTTTTGTCACTCTAGCAGCGAAGACATGGAAGTTGTTCATTCTCCTACCAATGGTCCTCAGGGTCAAATGCCAAAGGGTACATTATTGAAGTCTAATTCATTCAGCACCTTAAATTCCAAGCCGAGGGTCAAACTTGTTGATGAAGTTGTTACTCAAAAGCAGAAAGGTGCTGGAGAACATGCCTCTAAGAGTATGGAGACACCAGCTCGGATGATAAGCAGATCTATGTCATTCAAATCAACAAATTTGGGCCGTTCAAGTGCTATtgaatcaaaagttaaaatgctTTCTTCGAAGTCTTCACATGTTCTGGATATGAAAGGATCAAACCATGCAAAAGAATGGGGTGCAGTTGACAGGAAAAAATTGTCTAGGGTTGATCGTCCTGCAGTTTGTTCAACAATGTCTAGTTCTGTCGTTTCCACTCCTAAGGGTGACCAGAAGCTCACACCTCACGGTGAAACAAGTAAGCCTTTATCGGGCAACAGCCGAGAGTTGAAGGTTAACCATGATGGAAAATCAAGTAGCTTCTCAAAGACAACCAGTAGTCTAGGCCGTAAAGGTGTAGAAGCTCCCAATAGTTCAGaTAGGACATCCATCATTCTTGGTGGAACTCTACAAGATGTGCAGCCTAGATCACGGGAAACTACAAATCAGGCTGAGAAAAACAGAGAAGGCTCTAGTGACTGCACGAGGCTTGGTATTAGCACTGCTTCAAAAAGCATATTCTGTCCTAAGTGTAGGGGAAGTGGTCATTCTACAGAATGTTGTACTGTTGGTAGTATTGCAGAAGCCAGTATTGAATTATCTACTACAAGAAGTTCAAAAGAGGAGGTGCATAAAGGCAATAGATCGAAAGCTGCAATCAACGCTGCTTTGCTAAGGAGGCCTGAAATATGTAAAAAGAAGGAGGTACCTAATCAAATTGGTGGGTTTTCTACATCAGGCACAGATTTGAATTGTGAAGCTATTTCCCAGGACCAAGCATTAACACCAAAGAATAGTGTAGCTGCTGAAATAACTCATGATGGACAGGAAAATCTTGAAAGCTCTATTTCTGAAACTTCCAAATGCTCATCTATCAATGATTTGAAGCAGCTTAATGCATGTCAAATTGATTCTTGTCCTCACCCCGAGAACTCAGATCCTGTTGGTCCTGCTGGAAAGCCTCCAGTGAGAGACTTGTATAATGAAGCTTTGGCAATATCAAATGTTCTTTCAACTACAGTGGCCATTCCTGAATATGATTATGTCTGGCAGGGCATCTTTGAGGTGCATAAAGGTGGAAAACCCCCGGACTTGTTTTCTGGAATTCAAGCACATTTGTCTGCTTGTTCTTCACCTAAAGTTCTTGAAGTAGTAAAAAACTTTTCACCCAATGTGATTCTCAATGAAGTTCCTCGTTTGAGCACATGGCCATCACAGTTTAATCAAGGTGGTGCTAAAGAAGATAACGTTGCTCTTTACTTCTTTGCCAAAGATGTTGAAAGTTATGAGAGACACTATAAGGGTCTATTGGATCACATGATTAGAAATGATTCAGCACTAAAAGCAATATTTGATGGTGTTGAACTTCTCGTATTCCCATCCAATCAACTTCCTGAAAAATCACAGCGTTGGAATATGCTGTTTTTTTTATGGGGTGTATTTATGGGGAGGAGGATGAAGAATTCAGATTCCACAGAAAAGATTTGTATCCCCAGTTTGAATGTAATTCcagttgaaaatgattttcccACTGCTGTTATGACTTTGTCTGAGACCTGCTGTTCACCAAAGCGTATGGATGAGGATTCAATTAATTGTGATAGAACATCCAGTGCGGTTCTTACATCTACTCCCATAGACAAGAGTCACGTTACATTGACTAGAAATTCTGATATCAAAGAAACTAATCTTGAGCAGACACATTTGGGATCACAAGTAAACTTAGAGCAGCAAGATAGTAGATTCAACATCAAATCTCCTTTGACCCTTCCAACAAGCAGTGCACAGTTGTGTCAAGAAATGAAATCCACTGGTTCATCCCTGAATGGTTGTCTACTGGAAGATGGACCAGACAGAGAATCTAAAATCTCTTTTGAAGCAATTGGCACTAGTAAAGTTGTGGAAACAAAAACTGATTGTGATATTTCCATTGAGCAAGAAAACTCTTTATCTGGAAATAAAGAGTTAGGTGCTGCAAAAATTATCACTGAGGACAAAATGTCAGAGAGAATGAACAGTGATAAAGATCAGGAAAGGCTTAAGAGGAAACAGAAGGAAGATTATCGATTTATTGACATAGAGGCAGCAATTGAGGAAGACCTGACGTTAGAAGGGGTCAACTGTAGGCAGCCTACCGATATAAATCTTAGAGATCCTTCCGACTCAGTTTTTCAGTCTTCTGGAGTTACATTTCAGAGAATGCCTTGGAGTGAGGTGAATGGTAAATCGGAAGATGGAGAAAGTTCCACCAAAAAGCTGAAAACAGGTTTATGTGGAATCTACGGAGGTAGCAGTTCTGGAGGTAGAGACGTTATTAATGGCAGTTTTGCATCATTTGCAAATGGCCTTGGTTCCTGTTCTCCAGTTGAGGACAAAGGATGTGAAGATGCTTGTGACGAGAAAATCATTCGTGAGGACTTGGGAACAATGGAAAGAACATTCTTTCCTGTTAATGCACGTAATAAAAATGACTTACAATTGGGTGAGGATAGCTGCCCGAAGAAAGGGCCTCATGAGCATGAGGACCAATTTCATGATGGGATCCCAAATCTAGAGCTAGCTTTAGGGGGTGATGCTAAACGAACACAGAAGGGAATGCTACCTTTCTTTGTTGGGGTAGTAGACAAGAAAAACATGCAGGGAAAGCCTCGGGATGGCTTGAGAGATGAGCTGGATGATGGTGTTGCTGCCTCCCTTTCCCTTTCATTGTCATTCCCATCTTCAGATAAGGAATGTGTGAAACCTGTTTCAAAAGCGGAGCAGCGTTTGCCTGATGGGAACCATGTTAATACTTCGTTGCTCCTTTTTGGGAGCTTCTCAGACAAATA 4457 0.4036 MTQSADMRRESGTCNVCAAPCSSCMHINRALMESKTGEFTDENCRLMEANQSSMDEGDASSVRSRACESLQHAVSEASNMLSVNSSHDSLSENADSRQALSNNYQGSKCLEVLDDYTSCLSRASEANLANSCHYRNADRINLSCRSTSVSCLGADVSGSAPSVDVPSFSEIPSYKDVDTDLSSPKIQSPCTQSLLSIPSIMDLKKDSSSHIPKKLSECSLEFIDQSSTKEAAPTAVFGEKSLPDKNSLIDCTAKVSENIHQNLETSTDNDVGGATEETVKCSVSGKQDERSDELVESPEVDMQEHQSEDESDKSDIVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLRKVPEGNWLCEECKYVEATENQRLEETENQRLGKSEVTLEIEKGGEERKLNKLGYTSQISAKRHSENIGITPAAKRQAVESSTGSPKPSSPKRLVSLSRESSFKSPDKGKVKPSNQLSFCHSSSEDMEVVHSPTNGPQGQMPKGTLLKSNSFSTLNSKPRVKLVDEVVTQKQKGAGEHASKSMETPARMISRSMSFKSTNLGRSSAIESKVKMLSSKSSHVLDMKGSNHAKEWGAVDRKKLSRVDRPAVCSTMSSSVVSTPKGDQKLTPHGETSKPLSGNSRELKVNHDGKSSSFSKTTSSLGRKGVEAPNSSDRTSIILGGTLQDVQPRSRETTNQAEKNREGSSDCTRLGISTASKSIFCPKCRGSGHSTECCTVGSIAEASIELSTTRSSKEEVHKGNRSKAAINAALLRRPEICKKKEVPNQIGGFSTSGTDLNCEAISQDQALTPKNSVAAEITHDGQENLESSISETSKCSSINDLKQLNACQIDSCPHPENSDPVGPAGKPPVRDLYNEALAISNVLSTTVAIPEYDYVWQGIFEVHKGGKPPDLFSGIQAHLSACSSPKVLEVVKNFSPNVILNEVPRLSTWPSQFNQGGAKEDNVALYFFAKDVESYERHYKGLLDHMIRNDSALKAIFDGVELLVFPSNQLPEKSQRWNMLFFLWGVFMGRRMKNSDSTEKICIPSLNVIPVENDFPTAVMTLSETCCSPKRMDEDSINCDRTSSAVLTSTPIDKSHVTLTRNSDIKETNLEQTHLGSQVNLEQQDSRFNIKSPLTLPTSSAQLCQEMKSTGSSLNGCLLEDGPDRESKISFEAIGTSKVVETKTDCDISIEQENSLSGNKELGAAKIITEDKMSERMNSDKDQERLKRKQKEDYRFIDIEAAIEEDLTLEGVNCRQPTDINLRDPSDSVFQSSGVTFQRMPWSEVNGKSEDGESSTKKLKTGLCGIYGGSSSGGRDVINGSFASFANGLGSCSPVEDKGCEDACDEKIIREDLGTMERTFFPVNARNKNDLQLGEDSCPKKGPHEHEDQFHDGIPNLELALGGDAKRTQKGMLPFFVGVVDKKNMQGKPRDGLRDELDDGVAASLSLSLSFPSSDKECVKPVSKAEQRLPDGNHVNTSLLLFGSFSDK 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva09g00002 1485 PANTHER - 1234 1476 - -
Bva09g00002 1485 PANTHER - 7 166 - -
Bva09g00002 1485 PANTHER - 200 1233 - -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 428 473 - -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 604 637 - -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 263 314 - -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 602 705 - -
Bva09g00002 1485 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1234 1476 - -
Bva09g00002 1485 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 166 - -
Bva09g00002 1485 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 200 1233 - -
Bva09g00002 1485 SUPERFAMILY FYVE/PHD zinc finger 312 371 IPR011011 -
Bva09g00002 1485 ProSiteProfiles Zinc finger PHD-type profile. 321 372 IPR019787 -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 647 688 - -
Bva09g00002 1485 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 385 IPR013083 -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 432 473 - -
Bva09g00002 1485 SMART PHD_3 323 370 IPR001965 -
Bva09g00002 1485 MobiDBLite consensus disorder prediction 282 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva09g00002 Bva-Chr9 12455 22539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva09g00002 320 394 C2H2 Transcription Factor Family AT3G01460 33.750 6.33e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva09g00002 - - gmx:100784908 1521.52