Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02422 ATGCTAATGGGCGCGCGCAGCACTGCTGCTAGGCTTGTGCGCGCATCTGCAGCATCAATATCAGATAATGAtgtcaataaaatattgttgaaCATCATCAACGTTAaggttgttgtttttgttgtgTTAGTGCTATCATCATGTGCGAGCATGTGCGCCTCGGACAGCACCATCAACGAGGCGGATGCTCTGTTAAAGTTCAAGGGTTCATTGAGCAATGTGGTAAGGCTAAGCAGTTGGGATCCGTCCATAAATCCAAGGCCACCATGCAGTGGGAAGCATAATTATTGGGAAGGCGTGGTTTGTGAAGATGACAAGGTATTGGGGTTGCGCCTGGAAAGCATGGGGTTGACAGGGAAAATAGATGTAGATTCTCTTGGCGCATTGCCATTTTTGAGAATGCTTAGCTTGATGAACAATACGTTTGTGGGTTCAATGCCAAATATAAAGATGTTGCAAAACTTAAAGTCACTTTTCTTATCCTATAATCATTTTTCGGGAGAGATTCCAGATGATGCATTTAAGGGTatggataaattaaagaaagtatATTTGGCCAATAACGAGTTCACGGGTAAAATCCCTTCATCACTTGCGTCCTTGCCTAATCTCATGCAGTTAAGGCTTGATGCAAACAAGTTTCAAGGGGGAATCCCTGATTTCAGCAACTGCACACATCTTGAGATGATCAATGTTTCTAACAACGAATTAGAGGGTCTCATCCCCGCCAATCTGAGCACCTTCCAGGCCAGCGCCTTTTCAGGGAATGCAAAACTATGTGGACGACCCTTGAAGGCATGCGACGTAGCGGCAGGGCCACCAATCCCAGTGGCCACTGTAGAGACTCCAGCCAAGACACCTGTTCTAAAAGTTATTGTGATTGTTATGTTAACAGCAGTAATAATAGCCGTGCTGGTTGCGGCGTTCATCAAATTCCGGTTGAGATCAAATCAAATGAGTGAGAAGCAGCAGATGATGGGATTGGAAGGTCATGCCATGTCCTCCACCGCCTTTTCTAGTTCAGGCCAAGTTTATCGTCAACAACAAGCTGCTGGGGTAGCAGTAGGGGCAGATCACGGTCATGGCAAGAGATCGTCAGCTGATCATCATCAGCAACAGCAAGCTGCCAAGCTGTCCTTCGTCAGGGATGACAGTCGACAGAGATTTGATTTACATGATTTGCTAAAAGCCTCCGCTGAAATTTTGGGGAGTGCCGCATTTGGATCTTCCTACAAGGCGGTTGTGTTGGAGGGCTCCCAAGTGGTGGTTGTCAAAAGGTATAAGCAAATGAACAATGTTGGAAGAGAGGAGTTCCATGAGCACATGAGAAGGCTTGGATCCCTCTCCCATCCTAATGTCCTCCCTCTTGTGGCCTATTATTataggaaagaagagaaactcTTGATCACCGATTTTGTTCACAATGGTTGCTTGGCCAGCAATCTTCATGGTAATCATAACTTTCTGGATTGGCCAACCCGCTTAAGAATCGCCAAAGGTGTTGCCAGGGGTTTGGCTTACTTGTATAACGCATTACCGACCTTAATAGTTCCTCATGGTCATCTCAAATCTTCCAATGTGCTTTTAGATGAATCCTTTAATCCCCTTCTCACCGATTATGCTCTCATTCCCGTCACAAACCTTGACCATGCACAACAGCACATGATGCCTTATAAGTCACCCGAGTATGCACAACTTGGCCGTATCACAAAGAAGACCGAGGTCTGGAGTTTAGGGATTCTAATACTGGAGATCTTAACAGGCAAGTTTCCAGAGAACTATCTTAAACACAGGCATACTAGTGATTCTGACATTGCCTCTTGGGTCAACATCATGGTCACCGAGAAGCGCACCGGTGAAGTATTTGACGTCGAGATGGGCGGAGTCGCCAATAGTAAAGCTGAATTGCTCAAACTCCTCAAGATTGGCTTGAGTTGCTGTGAGGAGAATGTGGAAAGAAGGTTGGATATCAAGGAAGCTCTTGACCAGATTGAAGATTTGAAAGAAGGTGAACCTGAACCTGATAATCATACCATAACTGTTACTTGTCATCATGGGGATGCTTATTCTACAGCGATCTG 2081 0.4407 MLMGARSTAARLVRASAASISDNDVNKILLNIINVKVVVFVVLVLSSCASMCASDSTINEADALLKFKGSLSNVVRLSSWDPSINPRPPCSGKHNYWEGVVCEDDKVLGLRLESMGLTGKIDVDSLGALPFLRMLSLMNNTFVGSMPNIKMLQNLKSLFLSYNHFSGEIPDDAFKGMDKLKKVYLANNEFTGKIPSSLASLPNLMQLRLDANKFQGGIPDFSNCTHLEMINVSNNELEGLIPANLSTFQASAFSGNAKLCGRPLKACDVAAGPPIPVATVETPAKTPVLKVIVIVMLTAVIIAVLVAAFIKFRLRSNQMSEKQQMMGLEGHAMSSTAFSSSGQVYRQQQAAGVAVGADHGHGKRSSADHHQQQQAAKLSFVRDDSRQRFDLHDLLKASAEILGSAAFGSSYKAVVLEGSQVVVVKRYKQMNNVGREEFHEHMRRLGSLSHPNVLPLVAYYYRKEEKLLITDFVHNGCLASNLHGNHNFLDWPTRLRIAKGVARGLAYLYNALPTLIVPHGHLKSSNVLLDESFNPLLTDYALIPVTNLDHAQQHMMPYKSPEYAQLGRITKKTEVWSLGILILEILTGKFPENYLKHRHTSDSDIASWVNIMVTEKRTGEVFDVEMGGVANSKAELLKLLKIGLSCCEENVERRLDIKEALDQIEDLKEGEPEPDNHTITVTCHHGDAYSTAI 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02422 693 Gene3D Ribonuclease Inhibitor 57 220 IPR032675 -
Bva08g02422 693 SUPERFAMILY Protein kinase-like (PK-like) 400 669 IPR011009 -
Bva08g02422 693 Gene3D Ribonuclease Inhibitor 221 268 IPR032675 -
Bva08g02422 693 ProSiteProfiles Protein kinase domain profile. 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02422 693 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Bva08g02422 693 SUPERFAMILY L domain-like 59 265 - -
Bva08g02422 693 Pfam Leucine rich repeat N-terminal domain 59 102 IPR013210 -
Bva08g02422 693 Gene3D Transferase(Phosphotransferase) domain 1 473 684 - -
Bva08g02422 693 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 33 674 - -
Bva08g02422 693 Gene3D Phosphorylase Kinase; domain 1 361 472 - -
Bva08g02422 693 MobiDBLite consensus disorder prediction 355 376 - -
Bva08g02422 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 674 - -
Bva08g02422 693 Pfam Protein kinase domain 400 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02422 Bva-Chr8 15560566 15563262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02422 30 680 Receptor kinase-like Gene Family AT5G35390 48.187 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva08g02422 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02422 - - gmx:100801053 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02422 08 15560566 15563262 Bva08g02422 08 15560566 15563262 ECH