Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02407 ATGGATGGCAGGGTTTGTGAACTTTGTAATGGAGAGGCTTTCCTTTATTGTCCCTCGGACTCTGCGTTTCTCTGCTGGAACTGTGATATCAGGGTTCACAAGGCCAACTTTCTTGTGGCTCGCCACATCAGAGAGGTTCTCTGCTGTAAATGTAAGTGTTTCGCCGGAAACCAGATATCCGGCGGTTTGGTCCGCCCTCTGAGCCCAATATGTCGATCGTGCTCACCATCTGCCGATGATGATTCCTTATCTTCTTCGTCTTCGGCCTGCGTTTCGAGCACTGAGTCTTGCGCCACCGCCCCCAAGAAGATTCGATTCCTAGGTCGCCGTAAGACGGAGAAGATCGCTTCTTCCAGTTCCGTTACCGATGTGTCTGGCGAGAACTGTAGCAATCCGGCGGAAGTGACTTCGACGACGAAGATGATACAACAGATGAAGGGGAGAGAATCTAGTGTGAGAAACATTGGATCCCGTGCTCTGAAGGCGGAGGAAGTTTTCATGAATTGGAGCAGGAAGATAGGGGTAAATGGTAATTGCGTAGCTTCGTTGGCGTTGCATGCCTTGAGATTCCGCCGGGAAAAGTTGACGGTACTACCGTTGAGGGTGGCTTTAGCGACGTCGTTCTGGATCGGTTTAAGATTTTGTGGGGACAGGTCCGCGGCTACGTTTCAGAATCTGAGAAGGGTAGAGGAGATCTCCGGGGTGCCAGGTAAGCTGATAGTAGCCACGGAAGCAAAGCTGGTACATGCGTTGAGACAGAGGAGAGCAAGGCGCGAATTGAAAGAAGGATGGGCCGAGTGTTA 803 0.5143 MDGRVCELCNGEAFLYCPSDSAFLCWNCDIRVHKANFLVARHIREVLCCKCKCFAGNQISGGLVRPLSPICRSCSPSADDDSLSSSSSACVSSTESCATAPKKIRFLGRRKTEKIASSSSVTDVSGENCSNPAEVTSTTKMIQQMKGRESSVRNIGSRALKAEEVFMNWSRKIGVNGNCVASLALHALRFRREKLTVLPLRVALATSFWIGLRFCGDRSAATFQNLRRVEEISGVPGKLIVATEAKLVHALRQRRARRELKEGWAEC 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02407 267 CDD Bbox1_BBX-like 5 44 - -
Bva08g02407 267 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 252 - -
Bva08g02407 267 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bva08g02407 267 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 1 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02407 Bva-Chr8 15464892 15466132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02407 6 266 C2C2-CO-like Transcription Factor Family AT3G21150 34.831 1.26e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02407 - - nnu:104609079 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02407 08 15464892 15466132 Bva08g02407 08 15464892 15466132 ECH