Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02390 ATGGATAGTGAGACTGAGACTGAGACTGAGATGAAGCAGAAAAAGGAATTCATTTTCCGGTCTAAATTGGATGATATTTACATTCCCAAACACCTTCCCCTGCATTCCTATGTGTTTGACAACCTCTCTGCATTTGGGTCACGCCCCTGTTTGATCAATGCCGTCACAGGGGATAACTACACTTACTATGACGTGGAACTCACCGCCCGGAGAGTCGCCTCTGGCCTCAACAAAATGGGCATCAAACAAGGTGAAGTCATCATGGTGTTGCTACCCAATTCCCCAGAATTTATCTTCTCCTTTCTGGGTGCTTCTTATCGTGGTGCCATCACCACTGCAGCGAACCCATTCTTCACAGCAGCTGAGATTGCAAAGCAAGCAAAAGCTTCAAAAGCCAAGCTCCTAATAACCCAGGCATGTTACTATGAAAAAGTCAAGGACTTGGATGCTAACCTCGTGTTTGTAGATTCTCCTCCACAAGGGCATTTGCATTTCTCAGAGTTGAGTGAAGCTAACGAGAATGAAATGGCAGAGGTGCAAATTAATCCAGATGATGTGGTGGCATTGCCCTATTCGTCGGGGACAACTGGTTTACCAAAAGGGGTGATGCTAACACATAAAGGGTTGGTGACTAGCATAGCACAGCAGGTGGATGGGGAGAACCCAAACCTGTATTTCCATTCTGAAGATGTCATTCTATGCGTGCTTCCCCTGTTTCACATCTACTCCCTAAACTCTGTTTTTCTATGTGGTTTAAGAGCCAAAGCTACAATCTTGTTGATGCCAAAGTTTGAGATAAATGCATTGCTGGGTTTGATACAGAAATACAAAGTGACAATAGCCCCAGTTGTGCCACCAATTGTATTGGCAATTACCAAGTCACCAGATCTTGACAAGTATGATCTCTCTTCCATTAGGATTTTGAAGTCCGGAGGGGCTCCTCTTGGCAAGGAACTCGAAGACACTCTCGGGGCTAAGTTCCCAAATGCCAGGCTTGGTCAGGGATATGGGATGACAGAAGCAGGCCCAGTGCTAACCATGAGCTTAGCATTTGCGAAAGAGGCAATGGAGGTTAAAGCAGGATCATGTGGCAGTGTGGTAAGGAACGCAGAGATGAGGATTGTGGATCCCGAAACCGGCGACTCTTTGCCCCCAAACCAAGCCGGTGAGATCTGCATTCGTGGAGATCAAATCATGAAAGGGTATCTTAATGATCCAGAGGCTACAGAGAGAACCATAGACAAAGAGGGTTGGTTGCACACGGGAGACATTGGGTACATCGACGATGACAATGAGCTGTACATAGTGGATAGGCTGAAGGAACTTATAAAGTATAAAGGGTTCCAAGTGGCCCCAGCTGAATTGGAAGCCCTCCTCCTTTCTCATCCAAAAATCTCAGATGCTGCTGTGGTCCCAATGAAGGATGAAGCAGCTGGAGAGGTCCCTGTTGCATTTGTGGCGAGGTCTGATGACACCCCAACCGAGGAAGACATTAAGCAGTTCATCAAAAAACAGGTGgtcttttataaaagaataaaccGAGTATTTTTCATTGATGTCATTCCCAAATCACCATCAGGCAAAATCTTACGCAAGGATTTAAGAGCAAAGTTAGCAGCAACCCCTGTCGTTCCACCAAATTA 1643 0.4553 MDSETETETEMKQKKEFIFRSKLDDIYIPKHLPLHSYVFDNLSAFGSRPCLINAVTGDNYTYYDVELTARRVASGLNKMGIKQGEVIMVLLPNSPEFIFSFLGASYRGAITTAANPFFTAAEIAKQAKASKAKLLITQACYYEKVKDLDANLVFVDSPPQGHLHFSELSEANENEMAEVQINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVFLCGLRAKATILLMPKFEINALLGLIQKYKVTIAPVVPPIVLAITKSPDLDKYDLSSIRILKSGGAPLGKELEDTLGAKFPNARLGQGYGMTEAGPVLTMSLAFAKEAMEVKAGSCGSVVRNAEMRIVDPETGDSLPPNQAGEICIRGDQIMKGYLNDPEATERTIDKEGWLHTGDIGYIDDDNELYIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVARSDDTPTEEDIKQFIKKQVVFYKRINRVFFIDVIPKSPSGKILRKDLRAKLAATPVVPPN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02390 547 Pfam AMP-binding enzyme C-terminal domain 454 528 IPR025110 -
Bva08g02390 547 SUPERFAMILY Acetyl-CoA synthetase-like 18 540 - -
Bva08g02390 547 CDD 4CL 28 534 - -
Bva08g02390 547 ProSitePatterns Putative AMP-binding domain signature. 189 200 IPR020845 -
Bva08g02390 547 Gene3D - 440 541 IPR045851 -
Bva08g02390 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 540 - -
Bva08g02390 547 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 12 540 - -
Bva08g02390 547 Pfam AMP-binding enzyme 45 445 IPR000873 -
Bva08g02390 547 Gene3D - 11 439 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02390 Bva-Chr8 15365129 15367414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02390 16 506 Monolignol Biosynthesis Gene Families AT1G51680 69.307 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02390 K01904 - jre:108986343 842.417