Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02387 atgaaggaaatggaaaagaagaagtacCCCATCGGGGCAGAGCATTATATTCTGTACGAGGAAGTTGGACAGGGTGTGAGTGCTTCCGTGCGCCGTGCCCTTTGCGTGACATTTAATGAGATTGTTGCCATCAAAATCCTTGATTTTGAACGTGACAATTGTGATCTGAATAACATTTCTCGTGAAGCCCAAACAATGGTCTTGGTTGACCACCCTAACGTCCTTAGATCACACTGCTCCTTTGTTAGTGATCATAATCTGTGGGTTGTCATGCCGTTCATGGGTGGTGGTTCCTGTCTCCACATATTAAAAGCTGCTTACCCAGATGGTTTTGAGGAGATTGTGATTGCTACAATATTGCGAGAGGTATTAAAAGGTCTAGAGTACCTTCATCATCATGGGCATATACATCGAGATGTCAAAGCTGGCAACGTTCTTTTAGATACACGTGGGGCAGTCAAGCTTGGAGATTTTGGTGTTTCCGCTTGTCTTTTTGATTCAGGTGATAGGCAACGTACGAGGAATACATTTGTAGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGACTTCAAAGCTGATATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCCCATGGCCACGCTCCTTTCTCGAAGTATCCTCCAATGAAGGTACTGCTTATGACATTGCAAAATGCACCCCCTAGCCTTGATTATGAAAGGGATATGAAGTTCTCTAAGGCATTTAAACAGTTGATTGGCATTTGCTTAGTGAAAGATCCCTCAAAACGACCTACtgcaaagaaattattaagaCACTCCTTCTTTAAGCAGGCTCGCTCAAATGATTATATTGCACGAACACTTCTGGATGGGCTTCCTGAATTAGGCGATCGCATGAAAGCCCTAAAGAGGAAAGAGGAAGATATGCttgcacaaaagaaaatgcctGATGGGCAGATGGAGGAATTATCACAGCCAATAGATCCAGCAAGGAAGACCTCCACTCACTGTGAAAACCTCCGCAAGAAGCCCTGCCACTACCATGACCGCCGCCACCATGAGAGCGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTGGAAGATTTGAAGGCACAGGCTTCCTTGATCCAGGATTTTGATGATCCTATATCTGATAACAATCTAGCAGGAAGCTCAAATTCCTTATCTACACTTGATACACAAGATAAGCAATTTCCAACTCCAAGTCAAAATGCCTCTCAAATTGCAGATATGGAAGATAATGATGAGATGCAAAATCAATCAGCCTCTTTTTCAGTTCATGCTTCCACAGTGAATGATGCCAAGGTTAGAAGTGAAAAATCTGATGATGACTCTAGCTCAAGCCATGAACCGCACTTTTCACATAATTCTTCATCCTGTCTTGATGATCATGTTGAACATAGCTTGGTTGAAAAATCTGACTTGGAGAATGTGGGAAGACCTGTAGAGTTCGTGACTGTTCCTTCTTTTCATAAAAGAGGATTGTCGTCAAGCGTCTTACCTGACATGACTCTTCCACCTATTAGAGGAGAAAGTCAGCTTcagaatatttcaaattgctATGCAACAGTAATTCCACAAACAGGAGATGATGTGCTTTCTGAACTTCCTTCTAAAGCTTCAAAATCATCAGCTAATTCTGATGACAGTGATGAGAAAGCAAAAGTACCAGTTGTTCAGCAGAGAGGACGCTTTAAGGTTACGTCTGAGAATGTTGACTTAGAGAAGGTGGGTTCATCTCCTGTACTGCAGAAGAGTCACAGTATGCAGGTTATTACCCCACACAATGCAGCTCAGGTACCCCCGGCTTTACCACCATCACCACCAAAGTCATCAAatgtttcttcgttttctctTTACCCAGCGCTACAGTCTGCGCTGCAGATGAATATTCAACAAAGGgaaattattttaaatataatgaagCAAATTGCTGCCCTCGAGTCTACAGTTGATGGAGCAAGCACTCAAGCTAATATTTCTGCAGTTGAGAAATCCTCGCTGGAATCAGCTCACGATAGGGAGAAGGAGCTACTTCAGGACATAAATGAGTTGCAGTGGAGGCTAATATGTGCCCAGGATGAGCTGCAGAGggtgaaaacagaaaatgctCAAGTGTG 2153 0.4115 MKEMEKKKYPIGAEHYILYEEVGQGVSASVRRALCVTFNEIVAIKILDFERDNCDLNNISREAQTMVLVDHPNVLRSHCSFVSDHNLWVVMPFMGGGSCLHILKAAYPDGFEEIVIATILREVLKGLEYLHHHGHIHRDVKAGNVLLDTRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPSLDYERDMKFSKAFKQLIGICLVKDPSKRPTAKKLLRHSFFKQARSNDYIARTLLDGLPELGDRMKALKRKEEDMLAQKKMPDGQMEELSQSEYKRGISGWNFNLEDLKAQASLIQDFDDPISDNNLAGSSNSLSTLDTQDKQFPTPSQNASQIADMEDNDEMQNQSASFSVHASTVNDAKVRSEKSDDDSSSSHEPHFSHNSSSCLDDHVEHSLVEKSDLENVGRPVEFVTVPSFHKRGLSSSVLPDMTLPPIRGESQLQNISNCYATVIPQTGDDVLSELPSKASKSSAANSDDSDEKAKVPVVQQRGRFKVTSENVDLEKVGSSPVLQKSHSMQVITPHNAAQVPPALPPSPPKSSNVSSFSLYPALQSALQMNIQQREIILNIMKQIAALESTVDGASTQANISAVEKSSLESAHDREKELLQDINELQWRLICAQDELQRVKTENAQV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02387 689 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 688 - -
Bva08g02387 689 MobiDBLite consensus disorder prediction 528 542 - -
Bva08g02387 689 Coils Coil 651 689 - -
Bva08g02387 689 Gene3D Transferase(Phosphotransferase) domain 1 97 330 - -
Bva08g02387 689 MobiDBLite consensus disorder prediction 362 442 - -
Bva08g02387 689 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Bva08g02387 689 MobiDBLite consensus disorder prediction 362 414 - -
Bva08g02387 689 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02387 689 MobiDBLite consensus disorder prediction 514 543 - -
Bva08g02387 689 CDD STKc_OSR1_SPAK 14 277 - -
Bva08g02387 689 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02387 689 MobiDBLite consensus disorder prediction 415 442 - -
Bva08g02387 689 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 688 - -
Bva08g02387 689 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bva08g02387 689 Pfam Protein kinase domain 18 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02387 689 Gene3D Phosphorylase Kinase; domain 1 4 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02387 Bva-Chr8 15342265 15350198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02387 4 671 MAP Kinase Kinase Kinase Kinase AT1G79640 64.474 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bva08g02387 Pkinase 2.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02387 K08835 - gmx:100780339 1007.28