Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02384 ATGATGAATGGTAGCCAAAAATCCTCAATTTCAACACAATCATACAATTCTCTTTATGTCAATCCCCTCAAAGAGCTCACGCACAGCCGTAGCTGCAGCGATTATGGCTGCTTAGCCTCCAAAGGCCATTACTTTGAAGATTTCAGGCAGCGAGACTGGAAAATTTTAGCTGATAATAAAGAGAATGCTATGcccaataagaaagaaattgctGTCTCTGGTGATAAAGAGAACGCAAAACCCGTAAATGGGTCTGCTGCGGCACCCAAACAGTTCTCAAAGTCCAAGTCTCTGTCCACAGACAGGATTTTAAAACCTTCCTCTCTTCAGTTCTGTCTGCAAATGAACGAGCCCGAGAAGGCTTTTAGGTTGAAGTTATGGGATCCCGCTGAATCGGAGAAGTCGAGCTCATTGAATATTTGGGACTTCTCTGATTCAGAAGCTGCTCCGGCTTCGTCCTGGTCTACACTGCCTAATAAGTCTTTGATCTGTAGACCATTGCCCATAGATATTGGAAGGTGTACTTGTGTAATTGTGAAGGAAGCGACCCCAGAAGTACTATCCGGGGGCAcgattttttccctttatacCTACGAAGGTCAGGGAAGGCAGAACAGGAAACTAGCTGTTGCTTACCACAAGCGGCGAAATGGGAGGTCTCAGTTCACCATTGCTCAGACTGTAAAAGGACTGTTAATGTCCAATTCGGATGATAGTTTTCTTGGGACTGTAACAGCTAACCTCATGGGTTCAAAATACGACATATGGAATCAGGGATATCGTCATGACTCCCATACCATAGAGCCAAAGTCACCTCTTGCTGTTGTAAAATTTGTGCCAACAATAACTACTTGTATGGGAAGTTACAGAAGCATAAGGGCTTATATACCCAAGCATCAAGCTATGTCGCTGAAGAACTCAACTCagTTACAACATGTCAAAGGACTGCCAATGGATTGGGAGGGAAAATTGGACGAGGTTCATCAACTATTCTCAAGGGTTCCTCTTTACAACAAGAATTCAAAGCTATTTGAACTTGACTTTAGAGATAGAGGAAGCGAAGGACTTCAAACCCAAAGATCGGTCAAAAATTTCCAGCTGACTCTGGAGGAGAATGGGAGGCAAACAATTCTGCAACTAGGTAGAGTGGCAAAATCAAAGTTTGTTATGGATTACAGACATCCTTTGACAGGTTACGAGGCGTTTTGCATATGTTTGGCTTCTATTGATCCAAAGATTTGCTGCACCGTGTA 1253 0.4214 MMNGSQKSSISTQSYNSLYVNPLKELTHSRSCSDYGCLASKGHYFEDFRQRDWKILADNKENAMPNKKEIAVSGDKENAKPVNGSAAAPKQFSKSKSLSTDRILKPSSLQFCLQMNEPEKAFRLKLWDPAESEKSSSLNIWDFSDSEAAPASSWSTLPNKSLICRPLPIDIGRCTCVIVKEATPEVLSGGTIFSLYTYEGQGRQNRKLAVAYHKRRNGRSQFTIAQTVKGLLMSNSDDSFLGTVTANLMGSKYDIWNQGYRHDSHTIEPKSPLAVVKFVPTITTCMGSYRSIRAYIPKHQAMSLKNSTQLQHVKGLPMDWEGKLDEVHQLFSRVPLYNKNSKLFELDFRDRGSEGLQTQRSVKNFQLTLEENGRQTILQLGRVAKSKFVMDYRHPLTGYEAFCICLASIDPKICCTV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02384 417 Pfam Tub family 165 410 IPR000007 -
Bva08g02384 417 PANTHER TUBBY-RELATED 2 415 - -
Bva08g02384 417 SUPERFAMILY Tubby C-terminal domain-like 151 416 IPR025659 -
Bva08g02384 417 MobiDBLite consensus disorder prediction 71 94 - -
Bva08g02384 417 PANTHER TUBBY-LIKE PROTEIN 8 2 415 - -
Bva08g02384 417 Gene3D Tubby Protein; Chain A 159 410 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02384 Bva-Chr8 15326707 15329866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02384 57 310 TUB Transcription Factor Family AT1G16070 51.908 6.24e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bva08g02384 Tub 9.1e-38 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02384 K19600 - jre:109010979 550.436