Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02379 ATGAAAATCAACGCCAAACAGTCCACAATGGTGCGTCCGGCCGAGGAGACGCCGCGCCGCTCGCTCTGGAACTCAAACATTGATTTGGTGGTGCCCAATTTCCACACTCCCAGTGTCTACTTCTACAGGCCCACCGGCGCCTCCGATTTCTTCGACGCCAAGGTGTTGAAGGAGGCTCTGAGCAAGGCCCTGGTGCCGTTTTACCCAATGGCTGGGCGGCTCCGGCGGGACGAGGATGGTCGTGTGGAGATTGACTGCGCTGGCCAAGGGGTTCTCTTCGTTGAGGCCGATACCACCGCTGTTGTTGATGATTTCGGTGACTTCGCTCCCACTCTTGAGCTACGGCAGCTAATTCCCGCCGTCGATTACTCCAGTGGAATTGAATCGTATCCGCTGCTAGTATTGCAGGTAACTTATTTCAAATGTGGAGGGGTCTCACTTGGCGTTGGCATGCAACACCATGCTGCAGATGGATTTTCTGGTCTGCATTTTATCAATACATGGTCAGATATGGCTCGTGGTCTGGAGCTTACCATCCCACCATTCATTGACCGGACACTACTCCGTGCCCGTGATCCGCCTCAACCGATATTTGATCACATCGAATACAAACCCCCTCCCCCCACGAAGAGTAATCTGCGACCAACAAAACCTGGTGCAGAGAGTGCAACCGTCTCCATCTTCAAATTGACTCGTGACCAGCTTAACAAACTCAAAGCAAAGtccaaagaaaatggaaacacAATCAACTATAGCTCTTATGAGATGCTGGCCGGTCATGTATGGAGGAGTGTGTGCAAGGCACGAGCACTTCCCCTGGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGATCAAGATTGCAGCCACCACTCCCACCCGGTTACTTTGGGAACGTGATCTTCACAGCCACGCCAATAGCCGTTGCAGGTGATCTCATGTCAAAACCAACATGGTATGCTGCTGGCAGAATCCATGATGCTTTGGTGAGAATGGACAATGAGTATTTGAGATCAGCTTTGGACTATCTAGAACTTCAACCCGATCTAAAAGCTCTTGTCCGCGGAGCACACACTTTCAGGTGCCCAAATCTCGGGATCACTAGCTGGGTTAGGCTCCCAATCCACGATGCTGATTTCGGGTGGGGGCGACCCATTTTCATGGGACCTGGTGGGATTTCATACGAGGGCCTATCTTTTATAATACCAAGTTCAAGTAATGATGGGACCATGTCAGTTGCAGTCGCCCTGCAGCCAGAGCATATGAAAGCGTTTCGGGAATTGCTGTACGACATTTG 1301 0.5035 MKINAKQSTMVRPAEETPRRSLWNSNIDLVVPNFHTPSVYFYRPTGASDFFDAKVLKEALSKALVPFYPMAGRLRRDEDGRVEIDCAGQGVLFVEADTTAVVDDFGDFAPTLELRQLIPAVDYSSGIESYPLLVLQVTYFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLELTIPPFIDRTLLRARDPPQPIFDHIEYKPPPPTKSNLRPTKPGAESATVSIFKLTRDQLNKLKAKSKENGNTINYSSYEMLAGHVWRSVCKARALPLDQETKLYIATDGRSRLQPPLPPGYFGNVIFTATPIAVAGDLMSKPTWYAAGRIHDALVRMDNEYLRSALDYLELQPDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGISYEGLSFIIPSSSNDGTMSVAVALQPEHMKAFRELLYDI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02379 433 Pfam Transferase family 1 428 - -
Bva08g02379 433 Gene3D - 212 433 IPR023213 -
Bva08g02379 433 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 432 - -
Bva08g02379 433 MobiDBLite consensus disorder prediction 198 219 - -
Bva08g02379 433 Gene3D - 1 205 IPR023213 -
Bva08g02379 433 MobiDBLite consensus disorder prediction 199 213 - -
Bva08g02379 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02379 Bva-Chr8 15308701 15311631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02379 1 433 Monolignol Biosynthesis Gene Families AT5G48930 80.831 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02379 K13065 - gmx:100820075 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02379 08 15308701 15311631 Bva02g02597 02 24237291 24240796 BWGD
Bva08g02379 08 15308701 15311631 Bva08g02379 08 15308701 15311631 ECH