Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02378 ATGGGGATATATCTCAGCACCCCAAAAACTGATAAGAGCTCTGAAGATGGTGAAAATAACAGGCTTCGTTATGGGGTGTCTTCTATGCAGGGCTGGCGTGCTACCATGGAAGATGCTCATGCAGCCATTCCAAATTTGGACGAGTCTACATCATTTTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTGCTAAGTTCTGTGCCAAGTATCTACACCAACAGGTGCTTAAGCATGAAGCTTACTCAGCTGGAGATTTTGGCACATCTTTAAAGAAATCTTTTCTCAGAATGGATGAGATGATGCATGGACAAAGAGGGTGGAGAGAATTAGCGGCTTTGGGagacaaaatagaaaagttcTCTGGTATGCTAGAGGGCTTTATATGGTCTCCCAGGAATGGTGAAGTCAATAACCATGTTGATGATTGGGCTTTTGAGGAGGGGCCCCATTCTGACTTCAGTGGACCAAACTGTGGATGCACAGCTTGTGTGGCAATTATCCAACAAAATCAACTTGTTATTGCAAATGCTGGTGATTCTCGTTGTGTATTATCAAGGAAGGGCCAGGCTTATAATTTGTCTAAAGATCACAAGCCTGATCTTGAGGTAGAGAAAGACAGGATTCTAAGAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAACGGAAGTTTAAACTTGGCCAGAGCCATTGGAGACATGGAATTCAAGCAGAACAAGTTTTTGCCTGCTGAAAAGCAAATTGTTACCGCTGATCCAGATATTACTTCTGTTGAGCTATGCGATGAGGATGAATTTCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCAAGCCAACAGCTCGTGGAGCTTGTACACGAACAGTTAAAGACAGAGAATAAACTATCTGTGGTTTGCGAGAAGGTATTCGATAGGTGCTTGGCACCAACAGCTGGGGGCGAGGGATGTGATAATATGACCATGATCTTGATTCAGTTTACAAGGACCTCTTCTGATCCAGATGCTTCTTCTGTTGTGGACGAGCCTTTGTCTTCTAATGAATCAACCATCTG 1058 0.431 MGIYLSTPKTDKSSEDGENNRLRYGVSSMQGWRATMEDAHAAIPNLDESTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYSAGDFGTSLKKSFLRMDEMMHGQRGWRELAALGDKIEKFSGMLEGFIWSPRNGEVNNHVDDWAFEEGPHSDFSGPNCGCTACVAIIQQNQLVIANAGDSRCVLSRKGQAYNLSKDHKPDLEVEKDRILRAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDEDEFLVIACDGIWDCMSSQQLVELVHEQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFTRTSSDPDASSVVDEPLSSNESTI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02378 352 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Bva08g02378 352 Pfam Protein phosphatase 2C 153 313 IPR001932 -
Bva08g02378 352 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Bva08g02378 352 MobiDBLite consensus disorder prediction 1 20 - -
Bva08g02378 352 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Bva08g02378 352 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Bva08g02378 352 MobiDBLite consensus disorder prediction 333 352 - -
Bva08g02378 352 Gene3D - 1 329 IPR036457 -
Bva08g02378 352 CDD PP2Cc 23 328 IPR001932 -
Bva08g02378 352 PANTHER PROTEIN PHOSPHATASE 2C 1 338 IPR015655 GO:0004722|GO:0006470
Bva08g02378 352 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 338 - -
Bva08g02378 352 SMART PP2C_4 13 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02378 Bva-Chr8 15302539 15307795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02378 1 330 PP2C-type Phosphatase Gene Family AT2G25070 75.831 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02378 K17499 - gmx:100499713 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02378 08 15302539 15307795 Bva08g02378 08 15302539 15307795 ECH