Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02376 ATGGCAGACCTTAAAGAGTGGTTACTCCCTGCATCGACTATTAACGTAGTAAGAGAGCCTGCTGCCAACCGACCACCTTTCCAGGGAATGGATCTTTTGGGGCTGAAGAAGCGAGGTCAAGGTCTTCGATCATGGATTCGTGTTGACACATCTGGAAACTCCCAGGTCATTGAGGTTGACAAGTTTACTATGATGCGACGTTGTGATCTACCTGCACGTGATCTTCGCCTACTTGACCCTCTATTTGTCTATCCATCAACAATCCTTGGTAGAGAGAAAGCTATTGTTGTAAATTTAGAGCAGATACGCTGTATAATCACAGCAGATGAGGTTCTTCTCTTGAATTCCTTAGATAGTTACGTATTGCACTATGTGATGGAGTTACAACGACGACTGAGAACAACTACAGTAGGTGAGGTTTGGCAGTCAGACAATTCAGAGATGACCCGAAGGAAAGGAAGTAGGAATTTTGACAATGTCTTTGTCAACACATCCCCTGATTATTTGCCTTTTGAGTTTAGGGCTCTTGAAGTTGCTTTGGAGTCTGCATGCACATTTCTTGATTCTCAGTTAGTAACATGTTCAAGTTCTGGCTATTTCCAAAAGGCATCGGAATTAGAAATTGAAGCTTACCCTTTACTGGATGAACTAACCTCAAAGATCAGTACACTGAATCTGGAACGTGTTCGTCGGTTGAAAAGCAGACTTGTAGCCTTAACCAGGAGGGTTCAAAAGGTAAGAGATGAAATAGAGCAGCTTATGGATGATGACAGTGATATGGCTGAAGTGTATCTTTCGAAGAAGAAAAGACGAATGGAATCACCAATTTCTGGAGAGCAGTCTCTGATGGGTTATAGATCAACTGATGTTGCATCCATTTCTGCTCCAGTTTCTCCTGTTTCATCACCTCCTGATGGTCTGAGGCTTGAAAAGAGCTTGAGCATAGCAAGAAGCCGACACGAGAGTATGAGGAGTACAGAAAGTACTACTGAAAATATAGAAGTGCTCGAGATGTTGCTAGAAGCATATTTTGTCGTAATTGATAGCACCCTGAATAAGTTGACATCGTTGAAGGAGTACATCGATGACACAGAAGATTTCATTAACATTCAGCTGGATAATGTGCGGAATCAGCTTATCCAGTTTGAGCTTTTACTTACAACTGCAACGTTTGTGGTTGCCATCTTTGGTGTGGTAGCAGGAATATTTGGAATGAATTTTGATATTCCATTATTTGATGTCCCTTCAGCATTCCAGTGGGTCCTTATCGTTACAGGAGTATGTGGAGTCTTCATATTTTGTGCATTTGTGTGGTTCTTCAAGTGCAGAAGACTCATGCCTCTATA 1346 0.419 MADLKEWLLPASTINVVREPAANRPPFQGMDLLGLKKRGQGLRSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLRTTTVGEVWQSDNSEMTRRKGSRNFDNVFVNTSPDYLPFEFRALEVALESACTFLDSQASELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDSDMAEVYLSKKKRRMESPISGEQSLMGYRSTDVASISAPVSPVSSPPDGLRLEKSLSIARSRHESMRSTESTTENIEVLEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFDIPLFDVPSAFQWVLIVTGVCGVFIFCAFVWFFKCRRLMPL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02376 436 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 373 426 IPR045863 -
Bva08g02376 436 PANTHER MAGNESIUM TRANSPORTER MRS2-10 4 436 - -
Bva08g02376 436 Coils Coil 217 244 - -
Bva08g02376 436 Gene3D - 31 115 - -
Bva08g02376 436 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 436 IPR039204 -
Bva08g02376 436 Gene3D Magnesium transport protein CorA, transmembrane region 374 433 - -
Bva08g02376 436 Gene3D Magnesium transport protein CorA, transmembrane region 116 367 - -
Bva08g02376 436 CDD Mrs2_Mfm1p-like 45 433 IPR039204 -
Bva08g02376 436 Pfam CorA-like Mg2+ transporter protein 334 427 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02376 Bva-Chr8 15295790 15299387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02376 1 436 MRS2 Gene Family AT1G16010 81.757 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02376 K16075 - gmx:100779803 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02376 08 15295790 15299387 Bva08g02376 08 15295790 15299387 ECH