Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02375 ATGCCCTCTAGACCCTTCCCTCCTAGTCCCAGCCCTCCAAGTCCCAGTTTTTTCACCAAAACCAAGGTCTTGTTCCTGGCGCTCACCATTTCGGCCTCTGTTGTTATTTTCTGTTCAATCCTTTACTTCATTTACCATCTCTGGAACTCTCTTGTAAACAGAGCTAGAACTATCCCATTTGATGCTAGTGCTCCCTTGAAGCTTCAAAGATTTTCGTCCAAAGAGCTAAAGCAAGCCACCAATTGCTTTGACGCGGCCAATGTCATTGGCAAAGGTGGGTCTGGCACCGTTTTCAGTGGAATACTCAAAGATGGGAAATTGATTGCTATCAAGCGCCTAGACGCTTTGTCTTTGCAGATAGAGCAAGAGTTTCAGAATGAGCTGCAGATTCTTGGTGGGTTAAGATCCCCATTTTTGTTGACGCTTTTGGGCTATTGTgtggaaaagaacaaaagaatcTTAGTGTATGAATATATGCCTAACAGAAGTTTGCAGGAGTCCCTCTTTGGAGATGGGTGTTTGAGTTTGAGCTGGGAGAGAAGATTTCACATAATTTTGGATGTTGCTAGAGCCTTGGAATTCTTGCACCTTGGATGTGATCCACCAGTGATTCATGGGGATGTTAAGCCAAGCAATGTTCTTCTTGATGCAGAGTATAGAGGGAAAATCTCAGACTTCGGCTTGTCAAGGATTAAAGTGGAGGGTGAATTTGGTGTTGATTTGTTTAGTCAGGTCTTGGGCAAGAGTCAAGAGCTATGGAAAAGCCAAGAACTTTCAGGGAATTTGACTGCAGAAACAACTGCAATTGGTACCCCAGTTGAAAGTGTAAATGAGGTAGATTTTGCTCTAGCTTTACAAGCTTCTTGTTCATCGAAGAATAGCCGAACATGTTATAATGTTAAATCTTTAAACTTGAATTCTTTGAATTATAATGCTAATATTGCTGGTGAGAGCGAAATTAGGAGTGCTGATGCAAAAGGGAAGGAAATATCAACTTTTGATATTGGTGGGGATGATTGGAAAAGTAGGTTTGTTCCTTATGATGATGAACTTTCTAGTATTGATCATAGTAAGGAGTTAAAATTCAATGCtta 1094 0.404 MPSRPFPPSPSPPSPSFFTKTKVLFLALTISASVVIFCSILYFIYHLWNSLVNRARTIPFDASAPLKLQRFSSKELKQATNCFDAANVIGKGGSGTVFSGILKDGKLIAIKRLDALSLQIEQEFQNELQILGGLRSPFLLTLLGYCVEKNKRILVYEYMPNRSLQESLFGDGCLSLSWERRFHIILDVARALEFLHLGCDPPVIHGDVKPSNVLLDAEYRGKISDFGLSRIKVEGEFGVDLFSQVLGKSQELWKSQELSGNLTAETTAIGTPVESVNEVDFALALQASCSSKNSRTCYNVKSLNLNSLNYNANIAGESEIRSADAKGKEISTFDIGGDDWKSRFVPYDDELSSIDHSKELKFNA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02375 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bva08g02375 364 SMART serkin_6 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02375 364 Gene3D Phosphorylase Kinase; domain 1 60 158 - -
Bva08g02375 364 SUPERFAMILY Protein kinase-like (PK-like) 61 237 IPR011009 -
Bva08g02375 364 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Bva08g02375 364 PANTHER - 1 299 - -
Bva08g02375 364 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02375 364 Gene3D Transferase(Phosphotransferase) domain 1 159 273 - -
Bva08g02375 364 PANTHER OS01G0253100 PROTEIN 1 299 IPR045271 GO:0004714|GO:0006468
Bva08g02375 364 Pfam Protein kinase domain 86 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02375 Bva-Chr8 15289999 15292515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02375 68 266 Receptor kinase-like Gene Family AT3G58690 42.647 3.59e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Bva08g02375 Pkinase 2.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02375 - - ccaj:109812677 576.63