Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02370 ATGAAGCAGATCAGGCACGACCCAGCAAGAGGAGCTCAAAATGTTACACCTCAGGCAAGGGGAGAGGTCCAGAAGGCTACCGCTCATGTCTTGGAAGAAGAAGCTCAAAATGTTACAGCTCAGAATATTACAGGATCAGAGGTAGTGCTGAGAGAGAACGCTCAAGAAGGCATACCTGGGATCTTGGAAGACACAGCACAGAGAAATACAACCTCAGATGTTGGTccaaagaattatttatttgcagATGAGGAGAATGATTCATCTCTATCTACCAGCATTGGTGATGCCAAACTGCTAGATGGACTTCTAGCTTCCACATTTGATAAAGGATCTTGCTTAAGTAGGATGTTAACCTTGACTTCAGCATTTCTCTACGCTGTCCTCACAGACCGAATTCTGCTTGTCAGGTTTGGGACTGATATGCTTGGTCTCTTTTGTGAGCCATTTCCTGATTCGTCATGGTTATTGcctaaaaattttctttactgGAAAAATTGGAAGCATGTTGAAACTTACGAAAACTTTCGAAAGAACGACATAGCAAACACTTACAAGGGTTTTTTGCCATCATTTCTAGTTCTCAATTTACAACACTCTCATGGTGGCAAGGAAAACTTTTTTCATTGTGAAAATAGTCAAGATCTTCTCCAGAAAGTTACTGTGTTGATTTTGACATCGGATCAATATTTTGCTCCTTCTCTTTTTATGATTCCATA 719 0.3894 MKQIRHDPARGAQNVTPQARGEVQKATAHVLEEEAQNVTAQNITGSEVVLRENAQEGIPGILEDTAQRNTTSDVGPKNYLFADEENDSSLSTSIGDAKLLDGLLASTFDKGSCLSRMLTLTSAFLYAVLTDRILLVRFGTDMLGLFCEPFPDSSWLLPKNFLYWKNWKHVETYENFRKNDIANTYKGFLPSFLVLNLQHSHGGKENFFHCENSQDLLQKVTVLILTSDQYFAPSLFMIP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02370 239 MobiDBLite consensus disorder prediction 1 24 - -
Bva08g02370 239 PANTHER FUCOSYLTRANSFERASE 2-RELATED 60 117 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bva08g02370 239 PANTHER FUCOSYLTRANSFERASE 2-RELATED 116 239 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bva08g02370 239 Pfam Xyloglucan fucosyltransferase 116 239 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bva08g02370 239 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 60 117 - -
Bva08g02370 239 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 116 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02370 Bva-Chr8 15279169 15280536 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02370 115 239 Xyloglucan Fucosyltransferase1 AT1G14110 45.385 2.80e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02370 K13681 - gmx:100799776 191.045