Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02362 ATGGATTATTCTTCGTGTATAAATACTTCCTTGGATCTCAACATCAATCCTCTCAGAGTTCATGAAGAGGTTCCTAAAAAGCAGATTGAAAGCAATTTTTTCTCATTGGGGAGGAAGTCTTCTGTAAAACAAGAAGAGTCTACTGGTGCCCTAGTAGAGGAACTGAGGAGGGTGAGTGCAGAAAACAAGAGGTTGACAGAAATGCTCACAGAGATGTGTGAGAACTACAACACTTTGCGGAGCCACTTGATGGAATATATGAGAAAGAATCCGGGAAAGGAGTCTAGCCCatcaaagaaaaggaagtcCGAAAGCAGCAATAACAACAGTAATCTAATGGGAATTAATGGAAACTCTGAGAGCAGCTCAACTGACGAAGAATCATGCAAGAAGCCAAGGGAGGAGACCGTCAAAGCGAAAATTTCAAGAGTTTATGTTAAGACGGAGGCATCTGATACAAGTCTTATTGTAAAGGATGGATATCAATGGAGGAAATACGGACAAAAGGTGACAAGAGATAATCCTTCTCCAAGGGCATACTTCAAATGCTCTTTTGCTCCAAGCTGCCCCGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAGTCTATTGTGGTTGCAACTTATGAAGGAGAGCACAATCATCCAAACCCTTCTCAGATGGAGGCAACATCTGGCTCCAGCCGTTGTGTGACCCTTGGATCAGTACCATGTTCAGCATCTATGAGCTCTTCAGGACCAACAGTTACCCTTGACTTGACAAAATCTAAGTCCAGCAAAGACTCCAAAGTTCCAAAACCAAAGATCGATTCCCCAGAAGTGCCACAGATTTTGGTAGAACAGATGGCTACTTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATTTCAGGAAAAATGTTGCACAAGTA 923 0.4215 MDYSSCINTSLDLNINPLRVHEEVPKKQIESNFFSLGRKSSVKQEESTGALVEELRRVSAENKRLTEMLTEMCENYNTLRSHLMEYMRKNPGKESSPSKKRKSESSNNNSNLMGINGNSESSSTDEESCKKPREETVKAKISRVYVKTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSIVVATYEGEHNHPNPSQMEATSGSSRCVTLGSVPCSASMSSSGPTVTLDLTKSKSSKDSKVPKPKIDSPEVPQILVEQMATSLTKDPNFRAALVAAISGKMLHK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02362 307 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g02362 307 Gene3D WRKY domain 141 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g02362 307 MobiDBLite consensus disorder prediction 89 136 - -
Bva08g02362 307 Coils Coil 55 75 - -
Bva08g02362 307 MobiDBLite consensus disorder prediction 238 273 - -
Bva08g02362 307 MobiDBLite consensus disorder prediction 102 123 - -
Bva08g02362 307 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g02362 307 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva08g02362 307 PANTHER TRANSCRIPTION FACTOR 1 306 - -
Bva08g02362 307 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva08g02362 307 MobiDBLite consensus disorder prediction 238 255 - -
Bva08g02362 307 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 306 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02362 Bva-Chr8 15251568 15253879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02362 4 307 WRKY Transcription Factor Family AT1G80840 55.873 3.16e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva08g02362 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02362 - - gmx:100798375 456.832