Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02360 ATGGAGGAAATATTGCAACAGGCTCTGCAGCAGAACGACATCACCGGTCCCAGGAGGAACATCCTTTTCAACAAGTATGAGATGGGGAGACAACTAGGACGGGGCAACTTCGCCAAGGTTTACTACGGAAGAAATCTCGTCACCAATGAAAGTGTAGCAATTAAGGTAATTAAGAAGGACAAGTTAAAGAAAGAGAGGCTCGTGAAACAAATCAAACGTGAAGTCTCCGTGATGCGCTTGGTCCGGCACCCACATATTCTTGAACTCAAAGAAGTGATGGCCACCAAAGGTAAAATCTTTTTGGTGATGGAATACGTTAAAGGTGGGGAATTGTTTTCCAAAGTTGCTAAAGGGAAGATGAAGGAAGATACTGCTAGAAAATATTTCCAGCAACTGATCAGCGCCGTCGACTTCTGCCATAGCCGCGGTGTCACCCACCGTGATTTAAAGCCGGAGAATTTACTTTTGGATGAGAATGAAGATCTTAAAGTTTCAGACTTCGGTTTATCCGCATTGCCAGAGCAGCGCCGGTCTGATGGAATGCTCGTTACGCCATGTGGAACGCCGGCTTATGTGGCGCCAGAGGTGTTAAAGAAGAAAGGATATGACGGTTCAAAAGCAGATATTTGGTCTTGTGGGGTAATTCTCTATGCCTTACTTTCTGGGTATTTGCCATTCCAAGGCGACAATATTATGAAGATTTATAGGAAGGCATTCAGAGCTGAATATGAATTCCCAGCATGGATTTCACCGGAGGCTAGGaatttgatttctaatttGCTGGTTGCTGACCCAGAAAAGAGATATTCAATCCCTGATATTATGAACGATCCTTGGTTTCAAATTGGGTTCATGAGACCAATTGCGTTTTCTATGAAGGAATCAGCCGTTGAAGATAACATTGATTTGAACGACGAAGaaaatgaggaagaagaaacgGAAATCACAGGAAAGCCCTCTCGTCCATTTTACAATGCATTTGAGATAATTTCGTCATTGTCGCATGGGTTTGATCTTAGAAACTTGTTTGAGACTCGGAAGAGATCCCCATCCATGTTTATATCCAAGTTTTCAGCTTCCGCAGTATTGGCAAAGCTCGAGACAGTGGCAAAGAAGCTAAATTTCAGAGTGACTGGGAAGAAGGACTACATGGTGAGAATGCAGGGTGCAACAGAGGGAAGAAAGGGGAAGGTAGCGATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTTGCGGTGGTGGAATTCTCAAAGTCTTCCGGAGATACACTCGAGTATATTAAGTTCTGTGAGGACGAAGTGAGGCCTGCTCTGAAAGACATAGTTTGGAGCTGGCAGGGTGATAATAACTGTCATTA 1358 0.4367 MEEILQQALQQNDITGPRRNILFNKYEMGRQLGRGNFAKVYYGRNLVTNESVAIKVIKKDKLKKERLVKQIKREVSVMRLVRHPHILELKEVMATKGKIFLVMEYVKGGELFSKVAKGKMKEDTARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGDNIMKIYRKAFRAEYEFPAWISPEARNLISNLLVADPEKRYSIPDIMNDPWFQIGFMRPIAFSMKESAVEDNIDLNDEENEEEETEITGKPSRPFYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKFSASAVLAKLETVAKKLNFRVTGKKDYMVRMQGATEGRKGKVAMTVEVFEVAPEVAVVEFSKSSGDTLEYIKFCEDEVRPALKDIVWSWQGDNNCH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02360 452 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02360 452 Pfam NAF domain 323 378 IPR004041 GO:0007165
Bva08g02360 452 ProSiteProfiles Protein kinase domain profile. 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02360 452 ProSiteProfiles NAF domain profile. 319 344 IPR018451 GO:0007165
Bva08g02360 452 Pfam Protein kinase domain 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02360 452 PANTHER - 19 451 - -
Bva08g02360 452 Gene3D Phosphorylase Kinase; domain 1 18 105 - -
Bva08g02360 452 SUPERFAMILY Protein kinase-like (PK-like) 22 281 IPR011009 -
Bva08g02360 452 Gene3D Kinase associated domain 1, KA1 320 444 - -
Bva08g02360 452 Gene3D Transferase(Phosphotransferase) domain 1 106 283 - -
Bva08g02360 452 ProSitePatterns Protein kinases ATP-binding region signature. 32 59 IPR017441 GO:0005524
Bva08g02360 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Bva08g02360 452 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 19 451 - -
Bva08g02360 452 CDD CIPK_C 325 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02360 Bva-Chr8 15235453 15237347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02360 19 450 CBL-interacting serine-threonine protein kinases AT5G10930 64.747 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva08g02360 Pkinase 1.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02360 - - lja:Lj3g3v2118210.1 706.827