Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02356 ATGTCAGGTGAAGAAGCTGTTGTTCCAGCTGAGACAGCTGCTGCAATTCCAGGTGAGCCAATGGACATCATGACTGCCTTGCAGCTTGTGCTGAGAAAATCATTGGCCTATGGTGGTCTTGTACGAGGCCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAGCTCTGTGTTTTGGCAGAAGATTGTGATCAATCTGACTATGTTAAACTAGTCAAAGGCCTCTGTGCCGAGCATAATGTTAGCTTGTTGACAGTTGCACATGCAAAGACGCTTGGAGAGTGGGCTGGTTTGTGCAAGATAGATTCAGAAGGCAAGGCTAGGAAGGTTGTCGGTTGTGGCTGTGTGGTTGTCAAGGATTTTGGAGAGGAACATGAAGCCTATAATGTCGTTTTGCAGCATGTGAAATCACAGTG 422 0.4668 MSGEEAVVPAETAAAIPGEPMDIMTALQLVLRKSLAYGGLVRGLHEGAKVIEKHAAQLCVLAEDCDQSDYVKLVKGLCAEHNVSLLTVAHAKTLGEWAGLCKIDSEGKARKVVGCGCVVVKDFGEEHEAYNVVLQHVKSQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02356 140 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva08g02356 140 PRINTS Ribosomal protein S12E family signature 110 123 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva08g02356 140 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva08g02356 140 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva08g02356 140 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva08g02356 140 PANTHER 40S RIBOSOMAL PROTEIN S12 1 140 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva08g02356 140 SUPERFAMILY L30e-like 20 138 IPR029064 -
Bva08g02356 140 Gene3D - 8 140 IPR029064 -
Bva08g02356 140 PANTHER 40S RIBOSOMAL PROTEIN S12 1 140 - -
Bva08g02356 140 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 119 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02356 Bva-Chr8 15212647 15214617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02356 16 140 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.000 1.06e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02356 K02951 - gmx:100305687 251.521