Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02340 ATGCCCAAGTTAGTTCTGAAAGCTGGAAGCCGACCACCATGGGTAGGTCTAGCAGCCGCTATTTGGGTCCTAGTAGCGGCTGGGAACCCCACCGCTTTTCCCCTCTATTCCTCCGCACTGAAATCTGTACTGGGTCTTAACCAGCAGCAGGTGTCTTTACTTGGTGTCGCCTGTGATGTTGGGGATAGTTTTGGTCTTCTTGCTGGTATTGCCTGCAACAAGTTTCCTCCTTGGGCTCTGCTTGCGGTAGGTGCTGTACTTTGTTTCTTTGGTTATGGAGTTCTCTGGCTTGCTGTTTCCAAAACTGTTTCCGCAATCCCATATTTGCTGTTATGGTTCACACTTTGTCTTGCCGCTCACAGTTGTGTATGGTTTGGCACAGTCGTGTTTGTCACCAACATGAGGAACTTCCCTCTCAGTAGAGGCACTGTTTCTGGAATTCTTAAAGGTTATGTGGGGATCAGTGCTGCAGTGTATACATTGATATATAGCATGGTACTGAAAGGGTCTGCTTCAGGACTTCTGTTGTTCCTTACCGTTGGGGTTCCTGTTTTAACTATAGCTTTGATGTACTTTGTCCAACCTTGCACTCCTCCTTCTGGGGAGGACTCCTCGGTGCATgtccattttattttcacacaGGCTACAAGTGTTTTACTCGCTGTCTTTCTTGTTGTAACCACTGTGGTAAATGACTTGTTTTCTATAAGTGATGCTGTTTCCTACACCTTACTTGCCATTATGATACTACTTATGATGACCCCCCTTGCAATTCCTATCAAAATGACACTATTTCCTGCCAgttcaaagaaaaatgggcCACAAGATAGTTCTTCGGATATGTTGGTACCCAGAGATGGTGATTCAACTCAGAAAGATCCATTATTGATGCCATCTTCTTCAGATCCATCTCTTGTAAGTTTTGATGAAATTGAGGATGCTTCATATGAATATATTCAGATACTTCTTGCAGAAGGGGAGGGAGCggtaagaaagaaaaggagaccTAAGAGGGGAGAGGATTTCAAGTTCCGTGAAGCTATTGTCAAGGCTGATTTCTGGCTTATTATAGTTGTTTTTTTCCTAGGAGTTGGTCCAGGAATAACAGTTCTTAATAATTTGGCTCAAATTGGAGTTGCTTTAGGTTTTGAAAATACAACCATATTGTTGTCAGTCTTCAGCTTTTGCAATTTTGTTGGTCGTCTTGGTGGTGGTGTTGTTTCTGAACACTCTGTCAGGTCAAAAACACTACCCCGCACATTTTGGATTACATGTACCCAGATTATTATGGTCGTAGTATTTATCCTTTATGCTTTTGCTATCAATGGGACCCTTTATGCTGCAACGGCTTTGCTTGGTATCTGCTTTGGGGCTCAATATTCTGTAATGGTCCCAACTGTCTCAGAGATATTTGGTCTGAAACACTTCGGTTTGATTAGCAATGTCATGATGTTAGGCAGTCCAATTGGTGCCGCGCTTTTCTCAGCTTTGCTTGCTGGTCATGTCTATGATGCAGAGGCTGCCAAGCAAGGATCCTCCACCTGCTATGGTGCAAGCTGCTTTGGCCTCACCTTTCTGGTTTTAGCTGGCGCTTGTGGACTGGGTAGCATCTTGAGTATAATTTTGACAATCAGAATAAGACCAGTCTACCAAATGCTGTATGCAGGGGGTTCATTTCGTCTCCCTCAAACTTCAGATAAATG 1703 0.4245 MPKLVLKAGSRPPWVGLAAAIWVLVAAGNPTAFPLYSSALKSVLGLNQQQVSLLGVACDVGDSFGLLAGIACNKFPPWALLAVGAVLCFFGYGVLWLAVSKTVSAIPYLLLWFTLCLAAHSCVWFGTVVFVTNMRNFPLSRGTVSGILKGYVGISAAVYTLIYSMVLKGSASGLLLFLTVGVPVLTIALMYFVQPCTPPSGEDSSVHVHFIFTQATSVLLAVFLVVTTVVNDLFSISDAVSYTLLAIMILLMMTPLAIPIKMTLFPASSKKNGPQDSSSDMLVPRDGDSTQKDPLLMPSSSDPSLVSFDEIEDASYEYIQILLAEGEGAVRKKRRPKRGEDFKFREAIVKADFWLIIVVFFLGVGPGITVLNNLAQIGVALGFENTTILLSVFSFCNFVGRLGGGVVSEHSVRSKTLPRTFWITCTQIIMVVVFILYAFAINGTLYAATALLGICFGAQYSVMVPTVSEIFGLKHFGLISNVMMLGSPIGAALFSALLAGHVYDAEAAKQGSSTCYGASCFGLTFLVLAGACGLGSILSIILTIRIRPVYQMLYAGGSFRLPQTSDK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02340 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 567 - -
Bva08g02340 567 SUPERFAMILY MFS general substrate transporter 10 197 IPR036259 -
Bva08g02340 567 CDD MFS_Mch1p_like 12 535 - -
Bva08g02340 567 SUPERFAMILY MFS general substrate transporter 225 548 IPR036259 -
Bva08g02340 567 Gene3D MFS general substrate transporter like domains 323 550 IPR036259 -
Bva08g02340 567 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 567 - -
Bva08g02340 567 Pfam Nodulin-like 13 260 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02340 Bva-Chr8 15140991 15144839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02340 1 565 Nodulin-like Gene Family AT1G80530 58.834 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02340 - - twl:119991706 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02340 08 15140991 15144839 Bva08g02340 08 15140991 15144839 ECH