Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02338 ATGTCCCATAAAATGGATGGGAATCATTCTTCTATACCCAGAAGCTCGTATGTAGAATTACAACCTCAGAATGATTACCCAAATCCTAGGACCTCTTCGGAAAAGGTGTCTTTTGGTGAAGATGGATATTTGGGATCCAAGGTTACTGGTCGGGATGATGTTGATGACgattttgaaattgatattgataattaTCCGCTTATTGTTGGCGGGGTTTCTAATAATGGTTCTGGGATTGCTGGGGCTGTGTTCAATCTAACGACAACGATAATTGGGGCAGGGATCATGGCCCTTCCTGCCACAATGAAAGTTCTTGGAGTGGTTTTGGGGATTGTATTGATAATCTTGATAGGAATTTTGTCAGAAATTAGTGCTGAATTATTAGTGCGCTTTTCAGTTTTGTCTAAGGCATCATCTTATGGAGAGGTTGTTGAATATGCAATGGGAAGACCTGCTAAGATTTTGTCCGAAATCTGTATCATTGTGAACAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCGGGTTCTGTTCATCATATGGGCgtttttgatcaattaatgGGAAATGGGATGTGGGATCATCGGAAGCTCGTGGTTTTGATTGCCATGGTGGTTTTTCTTGCGCCACTTTGTTCATTGGATAAAATCGATTCATTGAGCTTGACTTCTGCTGCCTCGGTGGGCCTAGCTGTTGTGTTTGTTGTGGTTACTTTTGTGGCTGCTTTTATTAAACTTGTCGAGGGGAAGATTGCCACTCCAAGGATGGGTCCTGATCTTAGCTCAAATGGTGCGATCTTGGATTTGCTTGTGGTGATCCCAATCATGTCAAATGCATATGTTTGCCATTTTAATGTGCAGCCAATATACAATGAACTCGAAGGGCGATCTGTACAGAAGATGAGCCGGGTAGGAAGGATCACAACCGTTCTATGCATTCTGGTGTATTCTTCAACAGCTATAGCAGGCTATCTACTATTTGGGAAGGACACGGAATCTGACGTCCTCACTAATTTTGATAGGGATCTTGGAATTCGATTTAGCTCGGCCATAAACTACATCGTCAGGGTTGGCTACATTCTCCATTTGATACTGGTTTTCCCCGTGATCCATTTCTCCCTACGCCAAACAGTGGACGCCTTGGTGTTTGAAAAAGCACCTCCACTTTCAGAGAGTAGGAAGAGATCTCTGGGATTGACAGCGGTTTTGTtgatcattatatatatcgGCTCTACCATGATTCCAAACATATGGACGGCTTTTAAACTCACCGGGGCGACAACAGCAGTTTCGTTGGGTTTTATATTTCCATCTCTTATTGCATTGAGATTAAGTCATCAGGGCAGTGGGTTGAGCCATTTGGAATGGTTTTTGTCGTGGTTAATGCTGGTATTGGCAGTGATCGTTAGCATAGTTGGAGTCATTGGTAATGTCTATAGCATCAAGAGTAAATCCGACTG 1475 0.4163 MSHKMDGNHSSIPRSSYVELQPQNDYPNPRTSSEKVSFGEDGYLGSKVTGRDDVDDDFEIDIDNYPLIVGGVSNNGSGIAGAVFNLTTTIIGAGIMALPATMKVLGVVLGIVLIILIGILSEISAELLVRFSVLSKASSYGEVVEYAMGRPAKILSEICIIVNNAGVLVVYLIIMGDVMSGSVHHMGVFDQLMGNGMWDHRKLVVLIAMVVFLAPLCSLDKIDSLSLTSAASVGLAVVFVVVTFVAAFIKLVEGKIATPRMGPDLSSNGAILDLLVVIPIMSNAYVCHFNVQPIYNELEGRSVQKMSRVGRITTVLCILVYSSTAIAGYLLFGKDTESDVLTNFDRDLGIRFSSAINYIVRVGYILHLILVFPVIHFSLRQTVDALVFEKAPPLSESRKRSLGLTAVLLIIIYIGSTMIPNIWTAFKLTGATTAVSLGFIFPSLIALRLSHQGSGLSHLEWFLSWLMLVLAVIVSIVGVIGNVYSIKSKSD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02338 491 MobiDBLite consensus disorder prediction 1 35 - -
Bva08g02338 491 Pfam Transmembrane amino acid transporter protein 78 481 IPR013057 -
Bva08g02338 491 PANTHER AMINO ACID TRANSPORTER 33 490 - -
Bva08g02338 491 MobiDBLite consensus disorder prediction 1 39 - -
Bva08g02338 491 PANTHER BNAC06G40470D PROTEIN 33 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02338 Bva-Chr8 15135278 15137330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02338 5 491 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.633 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02338 - - gmx:100791860 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02338 08 15135278 15137330 Bva08g02338 08 15135278 15137330 ECH