Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02322 ATGGCCATTGTATCCAACTCACCTCTCCCTTCTCTGTTCCCACCCTCCACTTCTGCtacttgttcttcttcttctacctACTTCTGTGGTGGGGTTCATCTCCGTACCCATAAGAACTTCATTTCTATccattcttcttctccttttccttcaTCGACTTTTAGTACAAAGGGTTCTCCAAGACGCTTTGGAACCGTGTATGCTGCTTCAGGCGACTATTATGCTACTCTTGGTGTCCCCAAATCTGCCACGGGCAAAGACATAAAAGCGGCTTATCGAAGGTTAGCTCGTCAGTACCATCCTGATGTAAACAAGGAGCCTGGGGCAACTGAAAAGTTCAAAGAGATTAGTAATGCATATGAGGTGCTATCAGATGATAAAAAAAGGGCATTGTATGATCAATATGGAGAGGCTGGAGTCAAGAGTACTGTGGGAGGAGCATCAAGCGCTTATACAACGAatccatttgatttatttgagaCATTTTTTGGGGCCAATATGGGTGCCTTTGCTGGAATGGATCCAACTGGATTTGGACAGCGCCGTAGGACTGTTACTAAGGGTGAAGACATACGTTATGATATCTCCTTGAAATTTTCTGAGGCCATTTTTGGAGCAGAGAAAGAATTTGATCTTTCCCATTTGGAAACATGCGAAGCCTGTACTGGTACTGGAGCAAAGATAGGTTCCAAGATGGGAATATGTTCAACTTGTGGTGGGAGGGGTCAGGTGATGCGGACAGAACAAACACCTTTTGGATTGTTCTCACAGGTTTCAATTTGCCCAAGCTGTGGAGGGGATGGTGAAGTCATATCTGAATATTGTAGGAAATGCAGTGGTGAAGGACGTATCcgtgtaaagaaaaatatcaaagtgAAAATTCCTCCCGGGGTTAATTCTGGTAGCATTCTTAGAGTTGCTGGCGAGGGTGATGCTGGGCCAAGAGGGGGCCCACCAGGAGATCTTTATGTATATCTTGATGTGGAAGAGATACCGGGAATTCAGAGAGATGGCATTAATCTCAACTCaacaatatcaataaattatctAGATGCTATATTGGGGGCTGTTGTTAAGGTAAAGACAGTTGAAGGCATTTCTGAACTACAAATACCTCCTGGTACCCAACCTGGAGATGTTCTTGTGCTTGCAAGGAAAGGTGCaccaaaattaaacaaaccaTCAATACGTGGTGACCACTTATTTACAGTTAAAGTTACGATACCAAAACGTATCAGTACAAAGGAACGTGAGTTGCTTGAAGAACTTTCTTTTCTAAGCAGCCGCCAAAAATCCCGTCCCAGAACTCCCTCTTCCACAGGAAATTCTGAAGTCTCTGCTACTCAGAGTGCTGAAAGTTCAACAGCAACAGCTGCAGAACAATCTGAAGAATCAGAAGGCCAAATTGACATATGGAAGCAAATAAAGGATTTTGCAGGGTCTGTGGCAAATGGAGCTCTAAAGTGGCTAAAAGATAACCTCTA 1484 0.4077 MAIVSNSPLPSLFPPSTSATCSSSSTYFCGGVHLRTHKNFISIHSSSPFPSSTFSTKGSPRRFGTVYAASGDYYATLGVPKSATGKDIKAAYRRLARQYHPDVNKEPGATEKFKEISNAYEVLSDDKKRALYDQYGEAGVKSTVGGASSAYTTNPFDLFETFFGANMGAFAGMDPTGFGQRRRTVTKGEDIRYDISLKFSEAIFGAEKEFDLSHLETCEACTGTGAKIGSKMGICSTCGGRGQVMRTEQTPFGLFSQVSICPSCGGDGEVISEYCRKCSGEGRIRVKKNIKVKIPPGVNSGSILRVAGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGINLNSTISINYLDAILGAVVKVKTVEGISELQIPPGTQPGDVLVLARKGAPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELSFLSSRQKSRPRTPSSRNSEVSATQSAESSTATAAEQSEESEGQIDIWKQIKDFAGSVANGALKWLKDNL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02322 493 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 63 437 - -
Bva08g02322 493 Pfam DnaJ central domain 218 282 IPR001305 GO:0031072|GO:0051082
Bva08g02322 493 SUPERFAMILY Chaperone J-domain 69 178 IPR036869 -
Bva08g02322 493 Gene3D - 188 324 - -
Bva08g02322 493 TIGRFAM DnaJ_bact: chaperone protein DnaJ 72 424 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva08g02322 493 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 420 IPR008971 GO:0006457|GO:0051082
Bva08g02322 493 MobiDBLite consensus disorder prediction 426 466 - -
Bva08g02322 493 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 205 285 IPR036410 -
Bva08g02322 493 Gene3D - 334 425 - -
Bva08g02322 493 CDD DnaJ 72 125 IPR001623 -
Bva08g02322 493 PRINTS DnaJ domain signature 92 107 IPR001623 -
Bva08g02322 493 PRINTS DnaJ domain signature 128 147 IPR001623 -
Bva08g02322 493 PRINTS DnaJ domain signature 74 92 IPR001623 -
Bva08g02322 493 PRINTS DnaJ domain signature 108 128 IPR001623 -
Bva08g02322 493 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 63 437 - -
Bva08g02322 493 Gene3D - 218 282 - -
Bva08g02322 493 Gene3D DnaJ domain 69 173 IPR036869 -
Bva08g02322 493 Pfam DnaJ C terminal domain 191 409 IPR002939 -
Bva08g02322 493 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 329 IPR008971 GO:0006457|GO:0051082
Bva08g02322 493 Hamap Chaperone protein DnaJ [dnaJ]. 69 477 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva08g02322 493 MobiDBLite consensus disorder prediction 426 463 - -
Bva08g02322 493 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Bva08g02322 493 CDD DnaJ_C 189 412 - -
Bva08g02322 493 Pfam DnaJ domain 72 133 IPR001623 -
Bva08g02322 493 ProSiteProfiles Zinc finger CR-type profile. 205 287 IPR001305 GO:0031072|GO:0051082
Bva08g02322 493 SMART dnaj_3 71 128 IPR001623 -
Bva08g02322 493 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Bva08g02322 493 CDD DnaJ_zf 218 282 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02322 Bva-Chr8 15027496 15033830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02322 73 135 C2H2 Transcription Factor Family AT1G74250 46.377 3.48e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02322 K03686 - cpap:110813197 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02322 08 15027496 15033830 Bva08g02322 08 15027496 15033830 ECH