Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02319 ATGGCTTTTAGCGCAATCTTTTGTTGCGGAAAGGGTTCGGATCGCAAAGCACGAGTAAAGAAACAACCTACATGGCGGGTCTTTTCACTGAAGGAACTACACTCAGCTACAAATAATTTCAACTATGATAACAAGCTCGGAGAAGGGGGATTTGGCAGCGTGTACTGGGGTCAGCTTTGGGACGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGAGATGGAATTTGCTGTCGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGCCTACGCGGGTACTGTGCTGAAGGGCAGGAGCGGTTAATTGTATATGACTATATGCCAAATTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCAGCAGAATGCCTTCTTGATTGGAATAGACGAATGAATATTGCAATTGGGTCCGCTGAGGGAATTTTATATCTCCACCATCAAGCAACACCGCACATCATCCATAGAGACATTAAAGCAAGCAATGTGCTGTTGGATTCAGATTTCCAGGCACAAGTTGCTGATTTTGGTTTTGCTAAGTTGATCCCTGATGGGGCGACTCATGTGACAACAAGAGTTAAAGGCACTCTTGGCTACCTTGCACCTGAATATGCTATGCTTGGGAAAGCATCTGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTAGAGCTTGCAAGTGGCAGGAAACCAATTGAAAAACTAAGTGCCACAATGAAACGAACAATAACTGACTGGGCGCTACCATTAGCTTGTGAGAAGAAATTTAGTGAACTTGCAGATCCAAAACTAAACGGCGAATATGTGGAGGAAGAGCTTAAAAGGGTTATTTTTATTGCAATTGCGTGTGCTAACAGTCAGCCTGAGAAGAGACCCACCATGCTTGAGGTGGTAGAGCTACTGAAAGGAGAATCTAAAGATAAGTTGGCTCAGCTAGAGAACAGTGAACTGTTTAGGATCCCTCAGGCTGTAGACTACAATGACGGGACATCAGCTGCTGAAGACAGTTCAGACTTCATCTCAGAAGAGAAGGAACCGAAACATGAGTTGAAAGATAATACTGCGCTATG 1100 0.4364 MAFSAIFCCGKGSDRKARVKKQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWNRRMNIAIGSAEGILYLHHQATPHIIHRDIKASNVLLDSDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGRKPIEKLSATMKRTITDWALPLACEKKFSELADPKLNGEYVEEELKRVIFIAIACANSQPEKRPTMLEVVELLKGESKDKLAQLENSELFRIPQAVDYNDGTSAAEDSSDFISEEKEPKHELKDNTAL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02319 366 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Bva08g02319 366 ProSiteProfiles Protein kinase domain profile. 40 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02319 366 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02319 366 PANTHER OS01G0750732 PROTEIN 1 363 - -
Bva08g02319 366 MobiDBLite consensus disorder prediction 347 366 - -
Bva08g02319 366 Gene3D Phosphorylase Kinase; domain 1 9 115 - -
Bva08g02319 366 MobiDBLite consensus disorder prediction 337 366 - -
Bva08g02319 366 PIRSF ILK 10 325 - -
Bva08g02319 366 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Bva08g02319 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Bva08g02319 366 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02319 366 PANTHER BNAA05G14800D PROTEIN 1 363 - -
Bva08g02319 366 CDD STKc_IRAK 46 313 - -
Bva08g02319 366 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02319 Bva-Chr8 15001525 15004801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02319 28 339 Trihelix Transcription Factor Family AT1G70460 48.734 1.73e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bva08g02319 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02319 - - rcu:8282354 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02319 08 15001525 15004801 Bva02g02514 02 23842358 23845924 BWGD
Bva08g02319 08 15001525 15004801 Bva08g02319 08 15001525 15004801 ECH