Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02310 ATGGGCTTATTCAGATCTGGAACCTTGTTTTTCTGCATGCTACTTCTGTTTAGAACATGTCTTGCCAATAATCAACATATTGGCAGGATATATCCTGGCTTTACTGCATCTCGACTTGATTGGGACAACCATGGTGGATTCTTCTTGCTATCAAACAGCTCGGTCTTTGCAATGGGATTCTTCGGTACCCTGGATGTGTCCTTGTTTGTTTTGGTTGTTATTCACTTGAGTAGTTACAAGGTTGTTTGGACTGCTAATAGAGGCTCACTGGTTAgaaattctaataaatttgTCTTTGAAAATAATGGGAATGCCTATCTGGAAAGTGAGAACGGTCGGGTTTGGGCAACAAATACCACAGGACAAAAAGTTGCTGCTATGGAATTGAAAGATACAGGGAATTTGGTGTTGCTTGGGGAAAATGGGGCCGCTATTTGGCAAAGTTTCAACCACCCCACTGATACCCTTTTACCTGGTCAAGCATTTGTTGAAGGAATGAGGCTCAAAAGCTTTCCCAACCACAATAACTTGTCTAATTATCTTGCATATATGTCAGGAGATTTAGTTCTCTATGCAGGATATCAAACTCCGCAACTATATTGGTCCATATCACGTCAAGAACAGAAAAATGTCAGTGTAGAAGTTCGCTCTGCAGTTCTAGTGTCCAACTCATGGAATTTCTATGGCAAAAATGGAACTTTACTTTGGCAATTTGTCTTCTCTGATCATTCAGATCCTAAGGCAATGTGGGCTGCTATATTAGACCCTAATGGTGCAATCTCTTTCTTTGATCTTAATAAGGGAAAGTCTGCTCCTCCTGTGGCAACAAAAATACCAGAAGACCCTTGTGACATTCCTGAGCCTTGTGATCCATATAATGTTTGCTTCTTCGAGAACTGGTGTGAATGCCCTCACCTTCTTAAGTCTCGTTTTGATTGTAAACCTCCAAAAATCTCAACGTGTTCTAAAAGCTCATTAGATCTTCTTTATGTTGGTGAAAAGCTCGATTATTTTGCACTAGAGTATGTTTCcccattttcaaaatcatcaaCCCTTGATGCTTGCAAAGAGGCTTGTTTGAGCAACTGCTCTTGCCTCATGATTTTCTTCGAAAACAGTTCCCAGAGCTGCTTTCTTTTTGACCAGACAGGGAGTTTGCAGCGCTGGAAGGGGACCGCCGGTGGTTATGTTTCATATATGAAGATCTCCACGGCTCCTGTAAATGCAAATGGAGAAAATGGAAGCCACACAGTAACACTTCTTGTAGTAATTGTGATAGCACTGGTTATTACTTCCCTTGCTGTGGGTGTGGGATTCTTGTATtacaagaaaaggaagaatgcTGAGGAGTATTCTCAAGAAGATTTGGAGGAAGAAAACATCCTGGATAATATTTCTGGGATGCCTGCACGTTTTAGTTACACTACTCTTTGTAAAGCCACTAAGAACTTCTCAACAAAAATTGGCGAAGGAGGTTTTGGCTCAGTCTATCTAGGTGTGCTTCAAGACGAATCCCAGTTGGCTGTGAAAAAATTAGAGGGCATAGGGCAAGGGGCCAAAGAGTTCAAAGCTGAAGTTTCTACAATTGGAAGCGTTCACCATGTCCATTTAGTTAAGCTTAAGGGATTCTGTGCTGAGGGACCTCATCGTCTTCTTGTCTACGAGTTCATGGGGAGAGGTTCTTTGGACAAATGGATATTCAGGAACAATGAAAACAGTTTCTTGCTGAATTGGGATACAAGATTCAACATTGCATTAGGTACCGCAAAGGGATTGGCTTATCTTCACGAGGAGTGCGAAGTGAAGATTGTTCATTGTGATATTAAACCAGAAAATGTCCttcttgataataattttgttgccAAAGTTTCAGATTTCGGGTTGGCTAAGCTAATGAACCGAGAAGAGAGCCATGTTTTCACAACTCTAAGGGGCACAAGAGGATATCTAGCACCAGAATGGATCACCAAGTATGCAATTTCAGAGAAGAGTGATGTATACAGCTATGGCATGGTCTTGCTGGAGATTATTGGGGGAAGGAAGAATTACGATCAATGGGAAGTTGAAGAGAAGGTGCATTTTCCTACTTATGCCTTCAAAATGATGGAAGAAGGAAAGCTGAGAGAAATTCCAGACCCAAAAATAGATATTGATGAGAATGATGAAAGAGTTGTGACAGCCATTAAAGTTGCCCTATGGTGTGTCCAAGATGACATGAATTTGAGGCCATCTATGTCTAAGGTAGTGCAGATGCTTGAAGGTGTATGTCCTGTGCCTGATCCCCCAGCATCATCTCTGCTGGGTTCTTATTCAAGTTTCTTGAAAATTAGTAGTGGAGAGGCTTCTTCATCCGGGCAAGCAAGCTTTTATTCTAATGTACCCCTCTCATGTGTTCAGTTATCAGGGCCAAGATG 2414 0.4043 MGLFRSGTLFFCMLLLFRTCLANNQHIGRIYPGFTASRLDWDNHGGFFLLSNSSVFAMGFFGTLDVSLFVLVVIHLSSYKVVWTANRGSLVRNSNKFVFENNGNAYLESENGRVWATNTTGQKVAAMELKDTGNLVLLGENGAAIWQSFNHPTDTLLPGQAFVEGMRLKSFPNHNNLSNYLAYMSGDLVLYAGYQTPQLYWSISRQEQKNVSVEVRSAVLVSNSWNFYGKNGTLLWQFVFSDHSDPKAMWAAILDPNGAISFFDLNKGKSAPPVATKIPEDPCDIPEPCDPYNVCFFENWCECPHLLKSRFDCKPPKISTCSKSSLDLLYVGEKLDYFALEYVSPFSKSSTLDACKEACLSNCSCLMIFFENSSQSCFLFDQTGSLQRWKGTAGGYVSYMKISTAPVNANGENGSHTVTLLVVIVIALVITSLAVGVGFLYYKKRKNAEEYSQEDLEEENILDNISGMPARFSYTTLCKATKNFSTKIGEGGFGSVYLGVLQDESQLAVKKLEGIGQGAKEFKAEVSTIGSVHHVHLVKLKGFCAEGPHRLLVYEFMGRGSLDKWIFRNNENSFLLNWDTRFNIALGTAKGLAYLHEECEVKIVHCDIKPENVLLDNNFVAKVSDFGLAKLMNREESHVFTTLRGTRGYLAPEWITKYAISEKSDVYSYGMVLLEIIGGRKNYDQWEVEEKVHFPTYAFKMMEEGKLREIPDPKIDIDENDERVVTAIKVALWCVQDDMNLRPSMSKVVQMLEGVCPVPDPPASSLLGSYSSFLKISSGEASSSGQASFYSNVPLSCVQLSGPR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02310 804 PIRSF SRK 4 800 IPR024171 GO:0004674
Bva08g02310 804 Pfam D-mannose binding lectin 81 162 IPR001480 -
Bva08g02310 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Bva08g02310 804 Gene3D Hepatocyte Growth Factor 333 415 - -
Bva08g02310 804 ProSiteProfiles Protein kinase domain profile. 482 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02310 804 SMART serkin_6 482 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02310 804 ProSiteProfiles PAN/Apple domain profile. 321 404 IPR003609 -
Bva08g02310 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 804 - -
Bva08g02310 804 SUPERFAMILY Protein kinase-like (PK-like) 464 753 IPR011009 -
Bva08g02310 804 SMART blect_4 40 152 IPR001480 -
Bva08g02310 804 Pfam PAN domain 345 387 IPR003609 -
Bva08g02310 804 Pfam Protein kinase domain 485 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02310 804 Gene3D Transferase(Phosphotransferase) domain 1 557 756 - -
Bva08g02310 804 Gene3D Phosphorylase Kinase; domain 1 443 556 - -
Bva08g02310 804 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Bva08g02310 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 804 - -
Bva08g02310 804 ProSitePatterns Protein kinases ATP-binding region signature. 488 511 IPR017441 GO:0005524
Bva08g02310 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 204 IPR036426 -
Bva08g02310 804 CDD B_lectin 45 152 IPR001480 -
Bva08g02310 804 CDD STKc_IRAK 488 754 - -
Bva08g02310 804 Gene3D - 43 151 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02310 Bva-Chr8 14968103 14971576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02310 415 764 Receptor kinase-like Gene Family AT5G20050 44.947 2.41e-89 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva08g02310 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02310 - - gmx:100816004 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02310 08 14968103 14971576 Bva08g02310 08 14968103 14971576 ECH