Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02304 ATGGCGCAAATTTCGCTACATGGTACTCTCCACGTTACGATCTATGAGGTGGATAGGCTGGATATCGGTGGCGGTGGCAATTTCTTCAGCaagCTCAAGCAAAACCTTGAGGAAAAAGTTGGTTTTGGCAAGGGAGTTACTAAACTCTATGCAACCATTGATCTGGAGAAGGCAAGAGTAGGAAGGaccaaaattattgaaaaggaACATTCTAATCCTAGATGGTATGAGTCTTTCCACATTTATTGTGCCCATATGGCTTCAAATGTTATATTCACTGTAAAAGATGATAACCCTATTGGGGCAACCTTAATTGGAAGAGCATATGTTCCTGTTGAGGAAATCTTGGATGGTGAGGAAGTTGATAAATGGGTTGAAATCTTGGATGAGCACAAAAATCCAATAGAAGCAGGTTCGAAGATCCATGTGAAGCTGCAATATTTTGATGTCACAAAAGACCGCAACTGGGGTCGGGGTATAAGAAGTCCTAAATTCCCCGGAGTTCCATATACCTTCTACTCACAAAGACAAGGATGCCGGGTTTCTCTGTACCAAGATGCTCATGTCCCAGAAAATTTTGTCCCTAAAATACGTCTTTCTGGGGGCAAGATTTACGAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCCATCAACAATGCAAAGCACTTGATATATATTACTGGCTGGTCTGTTTATACTGAAATTTCCTTGGTGAGGGATTCTCGGAGGCCAAAGCCTGGGGGAGATGCCACACTTGGTGAACTGCTTAAGAGAAAGGCAAGTGAAGGTGTTAAGGTTCTAATGCTCGTCTGGGATGATAGAACCTCTGTTGGTTTGTTGAAAAAAGATGGTTTGATGGCTACTCATGATCAAGAAACAGAGCATTACTTCCAGAACACTGATGTGCACTGTGTCTTATGCCCCCGCAACCCTGATGATGGTGGAAGCTTTGTTCAGGATTTACAAATTTCTACCATGTTTACTCATCATCAAAAGATTGTGGTGGTGGACAGTGAGTTGCCAAGCGGAGGGAATGACAAGCGAAGAATTGTGAGTTTTGTTGGGGGTATTGACCTCTGTGATGGAAGATATGATACTGCCTTCCATACACTTTTTAGAACCCTGGACACAGCACACCATGATGATTTCCATCAGCCTAACTTTCCTGGTGCTGCCATCACAAAAGGGGGCCCCAGGGAACCTTGGCACGACATCCACTCCCGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAACAAGGTGGTAAGGATTTACTTATTTCACTGAGAGAACTTCAAGATGTCATTATTCCTCCCTCACCAGTAATGTTCCCCGATGACCATGAGATATGGAATGTTCAGTTATTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCAGAGACTCCTGAAGATGCTGCCAAATCTGGGCTTGTTAGTGGGAAGGATAATATTATAGATAGAAGTATTCAAGATGCTTATATTAATGCTATTCGACGAGCCAagaattttatctatattgaAAATCAATACTTCCTTGGAAGCAGTTTCTGCTGGAGTGCTGATGATATTAAGCCTGAGGACATAGGTGCTTTACATGTGATCCCGAAGGAACTTTCACTTAAGATTGTCAGTAAGATTGAAGCTGGCGAAAGGTTTACTGTGTATGTTGTGGTCCCTATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCTGTGCAGGCAATATTGGACTGGCAGAGAAGGACAATGGAGATGATGTACAAAGATGTTATTCAGGCACTCAGGGCCAAGGGACTCGAGGAGGATCCTCGTAACTATTTGACATTCTTCTGCCTTGGTAACCGGGAGGTGAAGAAACAAGGAGAGTATGAGCCTTCTGAAAGACCAGAACCTGATTCAGATTATGCGAGAGCCCAGGATGCTCGACGCTTCATGATTTATGTTCATGCTAAGATGATGATTGTTGATGATGAATACATAATTATTGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGCCAGGGACACTGAGATTGCCATGGGTGGTTACCAACCCTATCATTTGGCTACCAGGCAGCCTGCACGTGGTCAAATCCATGGCTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTCGATGACACCTTCCTCCAGCCAGAAAGCGAAGAATGCGTCAGGAAGGTAAACCAGACTGCTGACAAGTACTGGGATCTCTATGCAAGCGAGTCACTTGAACGTGACCTTCCCGGTCACCTGCTCCGCTATCCAATTGGGGTTGCAAGCGAAGGAGAGATTACGCCCCTACCTGGATTTGAATTCTTCCCGGATACCAAAGCTCGTGTTCTTGGTGCCAAAGCTGACTACATGCCGCCAATCCTTACTACTTA 2426 0.4423 MAQISLHGTLHVTIYEVDRLDIGGGGNFFSKLKQNLEEKVGFGKGVTKLYATIDLEKARVGRTKIIEKEHSNPRWYESFHIYCAHMASNVIFTVKDDNPIGATLIGRAYVPVEEILDGEEVDKWVEILDEHKNPIEAGSKIHVKLQYFDVTKDRNWGRGIRSPKFPGVPYTFYSQRQGCRVSLYQDAHVPENFVPKIRLSGGKIYEPHRCWEDVFDAINNAKHLIYITGWSVYTEISLVRDSRRPKPGGDATLGELLKRKASEGVKVLMLVWDDRTSVGLLKKDGLMATHDQETEHYFQNTDVHCVLCPRNPDDGGSFVQDLQISTMFTHHQKIVVVDSELPSGGNDKRRIVSFVGGIDLCDGRYDTAFHTLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLISLRELQDVIIPPSPVMFPDDHEIWNVQLFRSIDGGAAFGFPETPEDAAKSGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFCWSADDIKPEDIGALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYKDVIQALRAKGLEEDPRNYLTFFCLGNREVKKQGEYEPSERPEPDSDYARAQDARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGGYQPYHLATRQPARGQIHGFRMSLWYEHLGMLDDTFLQPESEECVRKVNQTADKYWDLYASESLERDLPGHLLRYPIGVASEGEITPLPGFEFFPDTKARVLGAKADYMPPILTT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02304 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bva08g02304 808 SUPERFAMILY Phospholipase D/nuclease 151 446 - -
Bva08g02304 808 Gene3D C2 domain 6 156 IPR035892 -
Bva08g02304 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824
Bva08g02304 808 Pfam C2 domain 9 127 IPR000008 -
Bva08g02304 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Bva08g02304 808 Pfam Phospholipase D Active site motif 655 681 IPR001736 GO:0003824
Bva08g02304 808 Pfam Phospholipase D Active site motif 326 364 IPR001736 GO:0003824
Bva08g02304 808 SUPERFAMILY Phospholipase D/nuclease 453 738 - -
Bva08g02304 808 PANTHER PHOSPHOLIPASE D 2 808 IPR015679 -
Bva08g02304 808 SMART C2_3c 9 124 IPR000008 -
Bva08g02304 808 CDD C2_plant_PLD 6 148 - -
Bva08g02304 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Bva08g02304 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Bva08g02304 808 Gene3D Endonuclease Chain A 477 698 - -
Bva08g02304 808 PANTHER PHOSPHOLIPASE D ALPHA 1 2 808 - -
Bva08g02304 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824
Bva08g02304 808 CDD PLDc_pPLDalpha_2 492 701 - -
Bva08g02304 808 Gene3D Endonuclease Chain A 201 442 - -
Bva08g02304 808 SMART pld_4 326 364 IPR001736 GO:0003824
Bva08g02304 808 SMART pld_4 654 681 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02304 Bva-Chr8 14947304 14951772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02304 1 808 Phospholipase D Gene Family (Wang group) AT3G15730 81.111 0.0 1408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02304 K01115 - gmx:100786410 1522.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02304 08 14947304 14951772 Bva02g02502 02 23786004 23790424 BWGD
Bva08g02304 08 14947304 14951772 Bva02g02502 02 23786004 23790424 ECH
Bva08g02304 08 14947304 14951772 Bva08g02304 08 14947304 14951772 ECH