Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02303 ATGGTTCAATCAAAGAAATTCAGAGGTGTCAGACAACGCCACTGGGGCTCTTGGGTTTCTGAGATTCGTCACCCACTACTGAAGAGGAGGGTGTGGCTTGGAACCTTTGAAACGGCTGAAGAGGCAGCAAGAGCATACGATGAAGCAGCCATTTTGATGAGTGGAAGAAACGCCAAAACAAACTTTCCAGTGGTCAATGATCAAATAGGCAACCCAAGTgccacttcttcttcttcctctgccAAAACACTGTCTGCAGTTCTCAGTGCAAAGCTGAGGAAGTGCTGCAAATCCCCCTCACCTTCTCTCACTTGCCTGAAGCTTGACACTGAGAACTCCCACATCGGAGTGTGGCAGAAGCGAGCAGGGCCTCGTTCTGACTCAAACTGGGTCATGATGGTTCAgctagaaaagaagaatgttGGAGATTCTGAGTCAGAATTGCCAATGCCTGATAGTGATACCGCAGAGAAGGTAAAACCAGAAGGAAGCAATGGCTTGGATGAAGAGCAGAAGGCAGCCTTGCAGATGATTGAAGAACTCCTCAATAGGAACtg 557 0.4452 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVVNDQIGNPSATSSSSSAKTLSAVLSAKLRKCCKSPSPSLTCLKLDTENSHIGVWQKRAGPRSDSNWVMMVQLEKKNVGDSESELPMPDSDTAEKVKPEGSNGLDEEQKAALQMIEELLNRN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02303 185 MobiDBLite consensus disorder prediction 140 167 - -
Bva08g02303 185 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 185 - -
Bva08g02303 185 MobiDBLite consensus disorder prediction 140 170 - -
Bva08g02303 185 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Bva08g02303 185 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bva08g02303 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 185 - -
Bva08g02303 185 Coils Coil 178 185 - -
Bva08g02303 185 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bva08g02303 185 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bva08g02303 185 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bva08g02303 185 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Bva08g02303 185 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bva08g02303 185 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02303 Bva-Chr8 14940847 14941830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02303 1 185 AP2-EREBP Transcription Factor Family AT1G15360 65.327 4.13e-79 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva08g02303 AP2 7.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02303 - - gmx:100796962 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02303 08 14940847 14941830 Bva08g02303 08 14940847 14941830 ECH