Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02270 ATGCATTATGGTTATAAGAAAAGCTTGTTGCCCCTGGAGAGTGGGAAGACTCAGAAACAGCCTCCCTCTCTCgctctctctctgtttttctCTCAGCGAGCTCtcatctctcttccatggagGTCGTGGAGCTTGCAAGATAGACTCAGGAGTTACGCATCTGCATCTGTGTCaatgtctttttttctctgttcttcTGAATCTTGCAGGCTagacatgaagaaagaaaacattgtcACTTTGAAAGCTGAAGAGCTCCCTGGTCGATTGACTCGTGCTCGAGCTGCCGCTCTTTGTGCTTCTGGACAGTTGCCCCCTTTAAAGGAGCAAccacaaataaatcaaaagcaGCCTCTACGAGCCAATCCAAAAAGAGCAGCTTCCGATAATACATGTCTTCAGCGTAAAAAGAGGACTGCTCTTCAGGATGTCACCAATATTTGCTGTGACAATTCGAATAGGAACTGTTTCAACCCAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGTTAAGGGTGGTCAAATTAATGATCATAAAGTTGTTCCTTCAGATGCTGTGGAACTACCACCACTACAAATTGACTCAAAACAGAAAGTTTTACCAGAAACAGTAGAAGCAGTACTCAGATTGGAAGATGCTATATGCTCATCAAGTTTGAAAGACAATGCACTTTCTCGGATGGGTGCTAGTGTAGTGTGTAGCACATATAATGGTCAGCTTGAAAGTCAGAAGTCTGAAATATCTGTTCAGCATCCAATATGTCAAAAGAAAGCCAAGAAAAGTTTCCTTCCTGAACTTCTGAGTGTAAAAAATCCAGAAATTCCTGATATAGATGCTGATCATGAAGATCCTCTATTATGCAGTCTCTATGCTGCTGATATCTGTCACAATTTACGTATTGCTGAGCTTTCAAGAAGGCCACATCCTAACTTCATGGAAACAGTGCAGCGAGATATTACTCAAAGCATGCGTGCCATACTGGTTGATTGGCTTGTAGAGgTTTCTGAGGAATATAAATTGGTACCAGACACGCTTTACCTTACTGTTTATCTCATTGATTGTTTTCTCTCCAAAAATTACATTGAAAGACAAAGACTTCAGTTGCTGGGCATCACTTGCATGCTAATTGCATCGAAGTACGAAGAAATTTGTGCTCCACCTGTCAAGGAATTCTGCTTCATTACTGACAACACGTATACAAGAGAGGAGGTGGTAGAAATGGAGACTCAAGTTTTGAAGTGTTGTCAGTTTCAATTGTTTGCTCCCACCACACAAACTTTCCTCAGGAGGTTTATTCGAGCAGCACAAGCTTGTTATAAGAGTCCTAGCCTTGAATTGGAGTTCCTTGCCAATTACTTAGCTGAACTATCACTGATGGATTATGGTTTCTTGAATTTCCGACCTTCCATTATTGCTGCATCAGCTATATTTCTTGCTAGATGGACATTAGATCAGTCAAAGCACACATGGAATTCAACTCTTGAACACTATGCCCGTTACAAGGCATCAGATCTGAAAACTGCGGTTCTTGCATTACAAGATCTGCATTTGAATTCCAATGGCTGCCCTCTGCGTGCCATTTGCACTAAATACAGCGAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCGCCAAAGCTGCTTGAAACTTTGTTTTG 1658 0.3914 MHYGYKKSLLPLESGKTQKQPPSLALSLFFSQRALISLPWRSWSLQDRLRSYASASVSMSFFLCSSESCRLDMKKENIVTLKAEELPGRLTRARAAALCASGQLPPLKEQPQINQKQPLRANPKRAASDNTCLQRKKRTALQDVTNICCDNSNRNCFNPTKIQAKKSKLVKGGQINDHKVVPSDAVELPPLQIDSKQKVLPETVEAVLRLEDAICSSSLKDNALSRMGASVVCSTYNGQLESQKSEISVQHPICQKKAKKSFLPELLSVKNPEIPDIDADHEDPLLCSLYAADICHNLRIAELSRRPHPNFMETVQRDITQSMRAILVDWLVEVSEEYKLVPDTLYLTVYLIDCFLSKNYIERQRLQLLGITCMLIASKYEEICAPPVKEFCFITDNTYTREEVVEMETQVLKCCQFQLFAPTTQTFLRRFIRAAQACYKSPSLELEFLANYLAELSLMDYGFLNFRPSIIAASAIFLARWTLDQSKHTWNSTLEHYARYKASDLKTAVLALQDLHLNSNGCPLRAICTKYSEDKFKCVAALSSPKLLETLF 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02270 552 Gene3D - 307 420 - -
Bva08g02270 552 MobiDBLite consensus disorder prediction 107 132 - -
Bva08g02270 552 SMART cyclin_7 329 413 IPR013763 -
Bva08g02270 552 SMART cyclin_7 426 514 IPR013763 -
Bva08g02270 552 PANTHER CYCLIN-A2-4 115 552 - -
Bva08g02270 552 SMART Cyclin_C_2 422 545 IPR004367 -
Bva08g02270 552 CDD CYCLIN 323 412 IPR013763 -
Bva08g02270 552 Pfam Cyclin, C-terminal domain 422 544 IPR004367 -
Bva08g02270 552 Gene3D - 293 541 - -
Bva08g02270 552 MobiDBLite consensus disorder prediction 107 121 - -
Bva08g02270 552 CDD CYCLIN 426 512 IPR013763 -
Bva08g02270 552 SUPERFAMILY Cyclin-like 282 419 IPR036915 -
Bva08g02270 552 Pfam Cyclin, N-terminal domain 293 419 IPR006671 -
Bva08g02270 552 SUPERFAMILY Cyclin-like 422 547 IPR036915 -
Bva08g02270 552 PANTHER CYCLINS 115 552 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02270 Bva-Chr8 14779299 14784544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02270 73 552 Core Cell Cycle Gene Families AT1G80370 52.066 1.54e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02270 K06627 - gmx:100793657 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02270 08 14779299 14784544 Bva08g02270 08 14779299 14784544 ECH