Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02267 ATGTCACCGGCGGAGTCCGACGAAGTCATCGGATTGAACTTCAAGGAGACTGAGCTCACCTTGGCCCTCCCCGGAGAGACTCAGGCAGCCAAAACCCATAATAAACGTGGCTTCTCAGAGACCTTTGATCTTCATCTACGCAGCAGCAGCGGCAACTGCTGTTCCACGAatgaaaaatcagaaaataattCCTTTTGCTCCACTAAATCACCGGCAACAAAAGCACAGGTGGTAGGGTGGCCGCCGGTGAGAGCGAGTAGGAAGAATGTGATGAAGGGCTGCAAGTATGTAAAGGTGGCGGTAGATGGAGCTCCATATCTGAGAAAAGTGGATCTTCAAATGTGTGACGACTATGAGCAGCTGCTGAGGTCGTTGGGGATCATGTTTAGTTTCTTGAGCATTCGTAGTGATTTGAATGAGAGGAAAATCATGGACCTTGGAAACAGAGTTGAATACGTACCCACCTACGAGGACAAAGATGGTGACTGGATGTTGGTTGGCGACATGCCCTGGAAgaTGTTTGTTGAATCGTGCAGAAGAATAAGGTTGATGATAAGCTCAGAGGCTATTGGCTTAGCTCCAGGGACAGATTCAAAGTGCACGAGCTTAAGTTGAAGAGAAGAGTTGGActaataattatgaatatgaTCATATCATATTCATGGAGTGGTTTCTGCTGTCCAGAGTCAGAGAGGTTTTTGACACCTTGGCTAATCTTAGGGagagaaattaataagagaGGCTGGCCTGTAATTAATTTACAGTACAAGCAAgtgc 777 0.4402 MSPAESDEVIGLNFKETELTLALPGETQAAKTHNKRGFSETFDLHLRSSSGNCCSTNEKSENNSFCSTKSPATKAQVVGWPPVRASRKNVMKGCKYVKVAVDGAPYLRKVDLQMCDDYEQLLRSLGIMFSFLSIRSDLNERKIMDLGNRVEYVPTYEDKDGDWMLVGDMPWKMFVESCRRIRLMISSEAIGLAPGTDSKCTSLS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02267 204 Pfam AUX/IAA family 92 194 IPR033389 -
Bva08g02267 204 Gene3D - 89 198 - -
Bva08g02267 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 3 190 - -
Bva08g02267 204 SUPERFAMILY CAD & PB1 domains 86 185 - -
Bva08g02267 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 190 IPR003311 GO:0005634|GO:0006355
Bva08g02267 204 ProSiteProfiles PB1 domain profile. 94 188 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02267 Bva-Chr8 14770620 14771875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02267 46 196 B3 DNA Binding Superfamily AT5G62000 28.947 1.12e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva08g02267 AUX_IAA 3.2e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02267 K14484 - nnu:104592292 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02267 08 14770620 14771875 Bva08g02267 08 14770620 14771875 ECH