Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02266 ATGGCAAAGGAAGGTCTTGGACTTGAGATCACAGAGCTGAGGTTGGGTTTGCCCGGTGGGGAACATAGTAGGGTGGATAAGAATGAGAAGAAGAGGGTGTTCTCGGAGATCTCCGGTGGCGATGAAAACAGCTGCTCCGATGACGGGAAACAACCGGCAAAGAATCAAGTTGTGGGGTGGCCTCCGGTGTGCTCGTACCGTAAGAGGAACAGCCTCAGTGAAGCGTCAAAAATGTACGTGAAGGTTAGCATGGACGGGGCTCCTTTCTTGCGTAAAATTGATTTGGGCATGCATAAGGGATACTCGGAGCTAGCTTTGGCCTTAGAGAGGCTCTTTGGTTGTCATGGAATTGGCGAAGCGTTAAAGGATGCGGACAACACTGAACACGTTCCCATCTATGAGGATAAAGATGGTGATTGGATGCTGGTTGGCGATGTCCCCTGGCAAATGTTCATTGAGTCATGCAAGAGGCTGAGGATTATGAAGAAATCGGATGCAAAGGGCTTGCTTTGCAACCAAAAGGgtcttcaaaattatttgta 542 0.4797 MAKEGLGLEITELRLGLPGGEHSRVDKNEKKRVFSEISGGDENSCSDDGKQPAKNQVVGWPPVCSYRKRNSLSEASKMYVKVSMDGAPFLRKIDLGMHKGYSELALALERLFGCHGIGEALKDADNTEHVPIYEDKDGDWMLVGDVPWQMFIESCKRLRIMKKSDAKGLLCNQKGLQNYL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02266 180 MobiDBLite consensus disorder prediction 19 37 - -
Bva08g02266 180 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 168 - -
Bva08g02266 180 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 168 IPR003311 GO:0005634|GO:0006355
Bva08g02266 180 ProSiteProfiles PB1 domain profile. 77 165 IPR000270 GO:0005515
Bva08g02266 180 Gene3D - 72 175 - -
Bva08g02266 180 SUPERFAMILY CAD & PB1 domains 70 162 - -
Bva08g02266 180 MobiDBLite consensus disorder prediction 18 53 - -
Bva08g02266 180 Pfam AUX/IAA family 44 169 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02266 Bva-Chr8 14763988 14766546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02266 73 169 B3 DNA Binding Superfamily AT4G23980 38.144 4.00e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva08g02266 AUX_IAA 7.7e-46 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02266 K14484 - gmx:547784 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02445 02 23530892 23533242 Bva08g02266 08 14763988 14766546 BWGD
Bva08g02266 08 14763988 14766546 Bva08g02266 08 14763988 14766546 ECH