Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02265 ATGGATGTTATCCCTCCGGCACCTAATAGCAACACTCAAACTGACCAATATCCTTTGCTGATGGAGCAACTGGAAAGCTATAATGTCCATCAGCACGTAGTTGATATATCAAGGAATGCTGATGCTTTACCCAGCTCATCTCATGGTGATCAATATCCAGAAATGCCTTTATCGCGGAATATAGATCAACCTCCTAGTGGCACTAGAATTACTGCTCATCAACCGCCTTCCTCTTCCTCAGCCATGTTAAATACTAGAGATTCCTCTTCGACAAGAAGAGGTGAGGGGTCTGGTCATCGCCGAAGGAGCCCATTGAATTCTGGACTGTGGATTTCTGTTGAGCTTGTTGTCACCGTGAGTCAGATCATAGCCTCTATTATTGTCTTGTCATTATCCAGGAATGAAAATCCACAAGCCCCATTACTTGAATGGATTGTGGGTTATTCATCTGGTTGTGTTGCTACACTTCCTATTCTATACTGGCGTTACCGAAACCGTAATCAAAGTACTGAACAAGATATCTCTCAACCATCTCAAGGGTCTTCCGGAAGAAATCCTCAAGAACCTACTTCTTATACAGCCATCTCCGTTGCTCATTTTTCAGATGAGGAGAGTAATCATGCTACAGAATCAGCGGCCAGAAGCGCTAGGATCCCTGGAGCCTTTAGTTCTAGGGTCAATGGATTAGTAGACCATTTCAAGATGGCTTTAGATTGTTTCTTTGCAGTTTGGTTTGTTGTGGGCAATGTGTGGATCTTTGGAGGCCACTCTTCTCCTTCTGATGCTCCTAAATTATATAGGTTGTGTATAGTGTTTCTTACCTTTAGCTGCATTGGATATGCCATGCCATTTATACTTTGTGCAACAATTTGTTGCTGCCTACCTTGCATAATATCTGTACTGGGCATCCGGGAGGATTTTTCTCAAACTAGAGGAGCGACAGTAGAATCTATTAATGCTCTGCCAACCTACAagttcaaaatgaagaaaaatgaaagtattGATGATCGTGATGTCAGCACTGCCGTATATGAAGGTGGGATCTTGGCGGCAGGGACAGAACAAGAGCGGACCATATCTGGAGAAGATGCTGTTTGCTGCATTTGCTTGGCAAAATATGTTGAAAATGATGAGCTTAAGGAGTTACCCTGTTTGCATGTCTTTCACGTGGAGTGTGTTGACAAATGGTTAAAGATAAATGCATCCTGTCCTCTTTGTAAAAGTGAAGTTGGCAACGGCAGTGGGGTGTCACCTTCAGAGAGGGAATCCAGTCAGCATTA 1280 0.4266 MDVIPPAPNSNTQTDQYPLLMEQLESYNVHQHVVDISRNADALPSSSHGDQYPEMPLSRNIDQPPSGTRITAHQPPSSSSAMLNTRDSSSTRRGEGSGHRRRSPLNSGLWISVELVVTVSQIIASIIVLSLSRNENPQAPLLEWIVGYSSGCVATLPILYWRYRNRNQSTEQDISQPSQGSSGRNPQEPTSYTAISVAHFSDEESNHATESAARSARIPGAFSSRVNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDFSQTRGATVESINALPTYKFKMKKNESIDDRDVSTAVYEGGILAAGTEQERTISGEDAVCCICLAKYVENDELKELPCLHVFHVECVDKWLKINASCPLCKSEVGNGSGVSPSERESSQH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02265 426 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 10 421 - -
Bva08g02265 426 PANTHER PROTEIN, PUTATIVE-RELATED 10 421 - -
Bva08g02265 426 SUPERFAMILY RING/U-box 358 412 - -
Bva08g02265 426 MobiDBLite consensus disorder prediction 41 103 - -
Bva08g02265 426 MobiDBLite consensus disorder prediction 61 91 - -
Bva08g02265 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 349 413 IPR013083 -
Bva08g02265 426 ProSiteProfiles Zinc finger RING-type profile. 366 407 IPR001841 -
Bva08g02265 426 CDD RING-H2_RNF111_like 365 407 - -
Bva08g02265 426 Pfam Ring finger domain 366 407 IPR001841 -
Bva08g02265 426 SMART ring_2 366 406 IPR001841 -
Bva08g02265 426 MobiDBLite consensus disorder prediction 170 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02265 Bva-Chr8 14754949 14758485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02265 1 417 C3H Transcription Factor Family AT1G80400 55.245 4.00e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02265 - - gmx:100819516 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02265 08 14754949 14758485 Bva08g02265 08 14754949 14758485 ECH