Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02255 ATGGGTGTGAACTCCAATAGAATAGAGGACTCTGATTGCAATAAAACCACCGTCAAAATCCAAGCCGAGATACAAATACCACCACTGGAAATTCATAGAGTTCGCTTGCCCCCTGAGCGAACCACACTGCAGAAACTAAGGCATAGGCTCTCTGAAATCTTCTTCCCAGATGACCCACTTCACAGATTCAAGAACCAAACTTGGCTCATGAAATTGTTTCTGGGTCTTCAATATCTCTTTCCTATTTTTCAATGGGGCCCTGACTACAATCTTAGCCTTCTCCGTTCGGATGTCATTTCTGGCCTCACCATTGCTAGCCTTGCAATTCCTCAGGGGATTAGCTATGCAAAGCTTGCAAATTTGCCACCTATTGTTGGACTATATTCAAGTTTTGTGCCTCCATTGATTTACTCTCTGCTTGGGAGCTCTAGACATCTTGGTGTTGGTCCTGTTTCAATCGCATCATTGGTTATGGGGTCAATGTTGAGCGAGACAGTTTCTTACACTCAAGATCCAATCCTCTACCTGAAATTGGGTTTCACTGCAACCTTTTTCGCTGGTGTATTCCAATCATCTCTGGGAATATTAAGGTTAGGCtttgtaattgattttctCTCAAAGGCAACACTGGTGGGTTTCATGGCTGGTGCAGCAATCATCGTGTCACTGCAGCAGCTGAAAGGGCTGCTTGGAATTGTACACTTCACCAACAAGATGCAAATTATTCCTGTGCTCTTCTCTGTTTTCAAACATAGAGATGAGTGGTCACTGCCAACAATTTTACTAGGATTTGGGTTCCTAGCCTTCCTATTGACCACAAGATACATAaGCCAGAAGAAACCACAACTATTCTGGGTTTCAGCAGCTGCTCCATTGACATCAGTTATTCTGTCAACCATCATAGTCTTTCTACTCAGAAATAAGACTCACAAAATTGCAACAATCGGTTACTTACCAAGGGGCCTTAATCCACCATCCCCAAATATGTTATACTTCGATGGACCTTATCTAGCTCTTGCTATCAAAACTGGCCTTGTCACTGGAATCTTATCTCTCACGGAAGGAATTGCCGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAAGTGGatggaaacaaagaaatgatGGCCATTGGACTTATGAACATAGCTGGCTCTTGCTCTTCATGCTATGTCACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCCGGAGCACAGACAACAGTTTCAAACATAATAATGGCTTCAGCTGTCCTTGTGACACTTCTCTTCCTTATGCCGCTGTTTTATTACACTCCAAACGTGGTTCTAGCAGCGATTATCATAACTGCAGTGGTTGGACTCATAGATTATCAATCTGCATATAAGTTGTGGAAGGTTGACAAGCTTGATTTCTTGGCTTGCTTGTGTTCCTTCTTTGGTGTCTTGTTCATCTCAGTGCCTCTAGGCCTTGGCATCGCGGTGGCAATATCAGTGTTCAAGATCTTACTTCATGTCTCTAGGCCAAACACGGTGATTTTGGGGAATATACCAGGAACACAAATATTCCATAACTTAAACCAATATAGGGATGCTCTAAGAGTCCcttcatttctcattttagCTGTAGAGTCTCCCATCTACTTTGCCAATTCAACTTACCTCCAAGAAAGGATGCTTAGATGGGTTCGAGAAGAGGAAGAACGTATAAAAGCAAACAATGAATCTGCATTAAAGTGCATCATTTTAGACATGACTGCTGTGACGGCCATAGACACAAGTGGAATTGACACTTTATGTGAGCTCAAAAAGATGCTGGAGAAAAGAACATTTCAGCTTGTGTTGGCGAATCCTGTTGGAAATGTTATGGAGAAGCTgcattattcaaaatttttgcatttgTTTGGGTTGAAAGGAATCTATCTTACGGTGGGAGAAGCTGTAGCTGACATTTCATTGCAATGGAAAGCTGAGCCTTG 1970 0.4117 MGVNSNRIEDSDCNKTTVKIQAEIQIPPLEIHRVRLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTWLMKLFLGLQYLFPIFQWGPDYNLSLLRSDVISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLGFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLFSVFKHRDEWSLPTILLGFGFLAFLLTTRYISQKKPQLFWVSAAAPLTSVILSTIIVFLLRNKTHKIATIGYLPRGLNPPSPNMLYFDGPYLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVVGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTVILGNIPGTQIFHNLNQYRDALRVPSFLILAVESPIYFANSTYLQERMLRWVREEEERIKANNESALKCIILDMTAVTAIDTSGIDTLCELKKMLEKRTFQLVLANPVGNVMEKLHYSKFLHLFGLKGIYLTVGEAVADISLQWKAEP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02255 656 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Bva08g02255 656 Pfam Sulfate permease family 94 473 IPR011547 GO:0016021
Bva08g02255 656 TIGRFAM sulP: sulfate permease 81 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva08g02255 656 ProSiteProfiles STAS domain profile. 525 648 IPR002645 -
Bva08g02255 656 Gene3D STAS domain 505 650 IPR036513 -
Bva08g02255 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 18 656 - -
Bva08g02255 656 SUPERFAMILY SpoIIaa-like 530 646 IPR036513 -
Bva08g02255 656 Pfam STAS domain 526 644 IPR002645 -
Bva08g02255 656 CDD STAS_SulP_like_sulfate_transporter 526 641 - -
Bva08g02255 656 PANTHER SULFATE TRANSPORTER 18 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02255 Bva-Chr8 14687050 14690763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02255 1 655 Inorganic Solute Cotransporters AT3G15990 74.886 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02255 K17471 - gmx:100817604 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02255 08 14687050 14690763 Bva02g02433 02 23454837 23458761 BWGD
Bva08g02255 08 14687050 14690763 Bva08g02255 08 14687050 14690763 ECH