Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02251 ATGGATGACACTGAGGATGATGCAAGGTATCCCTCTAACGCATATGGTATTAATCACCATGAGGGTTATGGCTCTCTGAATCGTCAGAAACTTCCAGCTAGGAGTGGTCCATATTCTCATCCAGTTGCGAATGAATATGCAGAagataataatgatgatgaagatgaagaagagttGGAAGAGGATCTTGATCAATGTAACAGTATTCAGCACAAAGATGTAAATGACGATGATGTTGCAGATGATGGTGGTTGTGGTGATGACAGCGATGAAGAAGAAGTGGAAGAGACTGAAGATGGGGAAGAGAATGATGATCATAATGATGGTCATGATAATGATAACCAAAGGGTGGAGGATGATTTAGAATGGCACCCAAAAAAGCTAAAGCTAAAGAGTTTAATTTCAACTTATGAATTTGCTCCTCGTGTACCGGCATCATCAACTATGGTTCCCTCAGTCCAAAAAGCATCTTTTGGTGGGAGGAATTCCCTTACTGACTGGACGGAGCATGAGACGTTTGTACTTCTTGATGCTTGGGGTGATCGGTATCTTCAACATGGAAGGAAGAGTCTTCGGTCAGAAGAGTGGCAAGAAGTTGCAGAAAAGGTATCAGaagtttcaaaaattgaaaggacTGATACTCAGTGTAGAAATCGTCTAGAtacattgaagaaaaaatacaaaaaagagaagtctGTATTATCAGAAATGGGTAGTGCAAATAGCAAGtgggtttattttaaaaggatGGATAAGCTGATGTCTTCTCCACCTCAACAATCTGGTCTTTCTTGTGGTTTGGACTCAGGAGAGTATGTTTTCATGAACCCTAGTGTTTATTTGAACCGTGCAAATAGATTGGATGAGATGAGGGATAGTCCAGGGAATTCAGAATCTACTGGTGAAGAAGGAGGTTCAGATGAACCTCagccaaagaaaagaaagcacgGAAGGAACAATGATGAACCTTCTTCCTTCAGATTGCTTGCAGATTCCATTCAGAAATTCAGTGAGATATATGAGAAGATTGAGAACAGCAAAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGGATGGATTTCCATAAGGAATTGGAAATGCACAAGAGACAGATTTTAGAGAGAGTGCAAGCCGAGATTGCAAAAATAAGGCAGAGAgatgaggaagaaaatgatggcTCTGCTGAGAATGGTGTGTG 1199 0.3678 MDDTEDDARYPSNAYGINHHEGYGSLNRQKLPARSGPYSHPVANEYAEDNNDDEDEEELEEDLDQCNSIQHKDVNDDDVADDGGCGDDSDEEEVEETEDGEENDDHNDGHDNDNQRVEDDLEWHPKKLKLKSLISTYEFAPRVPASSTMVPSVQKASFGGRNSLTDWTEHETFVLLDAWGDRYLQHGRKSLRSEEWQEVAEKVSEVSKIERTDTQCRNRLDTLKKKYKKEKSVLSEMGSANSKWVYFKRMDKLMSSPPQQSGLSCGLDSGEYVFMNPSVYLNRANRLDEMRDSPGNSESTGEEGGSDEPQPKKRKHGRNNDEPSSFRLLADSIQKFSEIYEKIENSKRQQMVELEKMRMDFHKELEMHKRQILERVQAEIAKIRQRDEEENDGSAENGV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02251 399 PANTHER OS01G0718900 PROTEIN 70 398 - -
Bva08g02251 399 MobiDBLite consensus disorder prediction 64 79 - -
Bva08g02251 399 MobiDBLite consensus disorder prediction 48 63 - -
Bva08g02251 399 MobiDBLite consensus disorder prediction 80 106 - -
Bva08g02251 399 MobiDBLite consensus disorder prediction 305 322 - -
Bva08g02251 399 Gene3D - 167 229 - -
Bva08g02251 399 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 70 398 IPR044823 -
Bva08g02251 399 MobiDBLite consensus disorder prediction 1 116 - -
Bva08g02251 399 MobiDBLite consensus disorder prediction 289 326 - -
Bva08g02251 399 Pfam Myb/SANT-like DNA-binding domain 166 253 IPR044822 -
Bva08g02251 399 ProSiteProfiles Myb-like domain profile. 167 224 IPR001005 -
Bva08g02251 399 Coils Coil 340 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02251 Bva-Chr8 14673263 14675417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02251 167 389 Trihelix Transcription Factor Family AT1G54060 32.090 9.06e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva08g02251 Myb_DNA-bind_4 1.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02251 - - tcc:18595893 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02251 08 14673263 14675417 Bva08g02251 08 14673263 14675417 ECH