Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02250 ATGAGCGTGGttggttttgattttggtaACGAGAGCTGCGTGGTTGCTGTGGCAAGACAGAGGGGGATTGATGTTGTACTTAATGATGAGTCCAAGCGTGAAACTCCCGCAGTTGTATGCTTTGGTGACAAACAACGCTTCATTGGAACAGCAGGGGCTGCATCTATTACGATGAACCCAAAGAATTCAATCTCACAGATAAAGCGATTGATTGGCCGACAATTCTCTGATCCTGAATTGCAACGAGATCTGAAATCACTGCCTTTTTTGGTAACTGAAGGGCCCGATGGATATCCATTAATTCATGCAAGCTATTTGGGTGAAGTTAGAACATTTACTCCTACTCAAGTCTTGGCAATGGTGTTGTCAGATCTCAAAGGCATAGCTGAGAAGAATCTTAATGCAGCTGTTGTTGATTGCTGCATTGGAATTCCTGTGTATTTTACTGATCTTCAGAGGAGGGCAGTCTTGGATGCTGCCACCGTTGCTGGTTTGCATCCTCTTCGCTTGATTCATGAAACTACAGCAACTGCCTTGGCTTACGGAATTTATAAAACAGATCTTCCCGAAAATGATCAGCTGAATGTTGCATTTGTTGATGTCGGACATGCTAGCATGCAAGTGTGTATTGCTGGCTTCAAAAAGGGGCAGCTGAAGGTATTGGCTCATTCATTTGATAGGTCTTTGGGTGGCAGAGATTTTGATGAGGTTTTGTTTCAGCACTTTGCTGCAAAATTTAAGGAGGAGTACAAGATTGACGTTTACCAGAATGCTAGAGCTTGTCTAAGGCTCAGGGCTGCTGTTGACAAGCTGAAGAAGATGCTTAGTGCAAATCCAGAGGCGCCTTTGAACATTGAGTGCTTGATGGAGGAGAAGGATGTGAGGGGCTTTATCAAGCGTGATGAGTTTGAACAACTAAGTATTCCAATTTTGGAACGTGTAAAGAGGCCATTGGAGAAGGCACTTGCCGAGGCAGGTCTTACGGTTGAGAATGTGCACATGGTTGAGGTGGTTGGTTCCGGTTCTCGGATACCAgctataaacaaaatattgacagaatttttcaaaaaggaGCCAAGGCGCACAATGAATGCCAGTGAGTGTGTTGCTAGGGGTTGTGCCTTGCAATGTGCAATTCTTAGTCCTACGTTTAAAGTGCGGGAATTTCAGGTTAACGAGAGCTTCCCCTTCTCAATTTCCTTGTCATGGAAAGGTACTGGTCCAGACTCACACGAGGGTGGATCAGATAATCCGGTTAACACTGTTGTGTTTCCCAAGGGTAATCCCATACCAAGTATAAAGGCTTTGACATTCTACAGGTCAGGAACATTTTCTGTTGATGTACAATATGCTGATGTGACTGATCTGCAAGCGCCTGCAAAGATCAGTACATATACTATTGGTCCTTTCCAAACTACAAAAAGTGAAAGAGCTAAAGTCAAAGTCAAAGTTTGCTTGAATCTGCATGGAATAGTGTCTGTCCAGTCAGCAACTCTCTTGGAGGAGGAAGATGTTGAGGTTCCAGTATCCAGAGAACCAGCTGgagaaaatactaaaatggaTACTGATGAACCTCCTGTGGACGCTGCTGCTCCACCAAGCTCAAATGACACTGATGTCAATATGCAAGATGCTAAGGCAGCCCCTGATGCGTCAGGGGTAGAAAATGGTGTCCCTGAGACAGGAGATAAGCCTGCGCAAATGGATACTGATACTAAGGTTGAGGctccaaagaaaaaggtcaagaAGACAAACTTACCTGTAGCAGAGTTAGTTTATGGAGCGTTGGCTCCTGTAGATGTGCAGAAAGCAGTTGAAAAGGAGTTTGAAATGGCTTTGCAAGATAGGGTGATGGAGGAGACGAAAGACAAGAAGAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTCATGACAAATATCAAGAGTTTGTCACGGATTCACAGAGAGAGCAGTTTATTGCTAAACTTCAGGTGGTGGAAGACTGGTTATATGAAGATGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGAGGAGCTCAAGAAGGTAGGTGATCCAATTGAAGAGCGTTACAAGGAATACATGGAGAGGGGTACAGTGATTGATCAACTCATTTATTGTATTAATAGTTACAGAGAAGCTGCTATGTCTAATGATCCTAAGTTTGATCACATTGACATCTCTGAGAAACAAAAGGTCTTGAGTGAATGTGTCGAAGCGGAGGCCTGGCTTAGGGAGAAGAAGCAACAGCAGGATTCACTTCCAAAGTATGCTAACCCAGTGCTCTTGTCGGCTGATGTGAGAAAGAAAGCCGAAGCTGTTGATAGGTTCTGTAAGCCGATTATGACGAAACCAAGACCGACTCCTAAGCCTGCTACTCCTGAAGCACCACCAACCACGCCTCCTCAGGGTGGGGAGCAACAGCAACCTCAGGGAGATACTAATACCAATGCCAACCCCAGCAGTAATGAAAATGCAGCAGGGGACAACGCTAGCCAGGTACCGCCAGCATCAACTGAACCAATGGAGACTGAGAAGCCTGAGAACACAAGCACTGCTTA 2576 0.4332 MSVVGFDFGNESCVVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASITMNPKNSISQIKRLIGRQFSDPELQRDLKSLPFLVTEGPDGYPLIHASYLGEVRTFTPTQVLAMVLSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATVAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFQHFAAKFKEEYKIDVYQNARACLRLRAAVDKLKKMLSANPEAPLNIECLMEEKDVRGFIKRDEFEQLSIPILERVKRPLEKALAEAGLTVENVHMVEVVGSGSRIPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGTGPDSHEGGSDNPVNTVVFPKGNPIPSIKALTFYRSGTFSVDVQYADVTDLQAPAKISTYTIGPFQTTKSERAKVKVKVCLNLHGIVSVQSATLLEEEDVEVPVSREPAGENTKMDTDEPPVDAAAPPSSNDTDVNMQDAKAAPDASGVENGVPETGDKPAQMDTDTKVEAPKKKVKKTNLPVAELVYGALAPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLHDKYQEFVTDSQREQFIAKLQVVEDWLYEDGEDETKGVYIAKLEELKKVGDPIEERYKEYMERGTVIDQLIYCINSYREAAMSNDPKFDHIDISEKQKVLSECVEAEAWLREKKQQQDSLPKYANPVLLSADVRKKAEAVDRFCKPIMTKPRPTPKPATPEAPPTTPPQGGEQQQPQGDTNTNANPSSNENAAGDNASQVPPASTEPMETEKPENTSTA 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02250 858 Gene3D - 186 360 - -
Bva08g02250 858 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Bva08g02250 858 MobiDBLite consensus disorder prediction 782 858 - -
Bva08g02250 858 CDD HSPA4_like_NDB 2 381 - -
Bva08g02250 858 MobiDBLite consensus disorder prediction 504 578 - -
Bva08g02250 858 PRINTS 70kDa heat shock protein signature 363 383 - -
Bva08g02250 858 PRINTS 70kDa heat shock protein signature 2 15 - -
Bva08g02250 858 PRINTS 70kDa heat shock protein signature 30 42 - -
Bva08g02250 858 PRINTS 70kDa heat shock protein signature 332 348 - -
Bva08g02250 858 PRINTS 70kDa heat shock protein signature 140 160 - -
Bva08g02250 858 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Bva08g02250 858 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Bva08g02250 858 Gene3D - 5 374 - -
Bva08g02250 858 MobiDBLite consensus disorder prediction 810 858 - -
Bva08g02250 858 Gene3D Actin; Chain A, domain 4 230 313 - -
Bva08g02250 858 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Bva08g02250 858 Gene3D - 598 705 IPR029048 -
Bva08g02250 858 MobiDBLite consensus disorder prediction 789 809 - -
Bva08g02250 858 PANTHER HSC70CB, ISOFORM G-RELATED 1 856 - -
Bva08g02250 858 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Bva08g02250 858 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 856 - -
Bva08g02250 858 MobiDBLite consensus disorder prediction 504 523 - -
Bva08g02250 858 Gene3D - 38 113 - -
Bva08g02250 858 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 796 IPR029048 -
Bva08g02250 858 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 596 696 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02250 Bva-Chr8 14666772 14672269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02250 4 731 Calmodulin-binding Proteins AT1G16030 28.707 4.66e-89 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02250 K09489 - gmx:100778196 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02250 08 14666772 14672269 Bva02g02427 02 23429683 23435080 BWGD
Bva08g02250 08 14666772 14672269 Bva08g02250 08 14666772 14672269 ECH