Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02240 ATGGATTTCAGGCAAAAATTTCTTGCAACCAGTTGGGGAAGAGAATTTATTGCGGGTGGCTTCGGTGGCATTGCAGGTATAATGTCTGGTTATCCTCTTGACACTCTTCGCATTAGGCAACAGCACTCCAACACTGGCTCCGCCTTCAGCATCCTTAGCAATGTGGTGAGCAAGGAAGGGCCTGTAGCCCTCTACCGAGGCATGGCTGCACCTTTGGCTACTGTGATTTTTCAGAATGCAATGGTTTTCCAAATTTATGCAGTTCTCTCAAGAGCATTTGACTCATCAGATAACGCCCCTCCTTCCTACAAAGGAGTTGCTCTAGGAGGAATTGGCACTGGTGCCCTACAAAGTCTAATGCTTTCCCCTATAGAGTTGGTAAAAATTCGTCTTCAGCTGCAGAACAAAAGCCAATCCACAGAATTTCAAAAGGGTCCTGTAAGGGTAGCGAAGGACATATGGAAAAAAGAGAATCTTCGAGGCGTGTACCGAGGCCTTGGCATCACTGTACTTCGAGATGCGCCTTCCTATGGTTTCTACTTCTGGACATATGAATACACTCGAGAAAAACTTCACCCAGGTTGCAGAAAAAGTTGTCAAGAAAGCTTAAATACTATGTTATTGGCCGGAGGATTAGCTGGGGTTGCGAGTTGGATTTGTTGCTATCCGTTAGATGTGATCAAAACTAGACTACAAGCTCAATCACCGTCTTCGCTGAAATATAACGGCATTCTTGATTGCCTTAGAAAGAGcatgaaagaagaaggacaTGCTGTGCTATGGCGGGGTTTAGGAACTGCCGTTGCTAGAGCCTTTGTAGTGAATGGTGCTGTATTTTCAGCTTATGAGATTGCCCTGAGGTGTctatataacaataacaatattcAAGCGGAGGAAACAATCTA 905 0.4343 MDFRQKFLATSWGREFIAGGFGGIAGIMSGYPLDTLRIRQQHSNTGSAFSILSNVVSKEGPVALYRGMAAPLATVIFQNAMVFQIYAVLSRAFDSSDNAPPSYKGVALGGIGTGALQSLMLSPIELVKIRLQLQNKSQSTEFQKGPVRVAKDIWKKENLRGVYRGLGITVLRDAPSYGFYFWTYEYTREKLHPGCRKSCQESLNTMLLAGGLAGVASWICCYPLDVIKTRLQAQSPSSLKYNGILDCLRKSMKEEGHAVLWRGLGTAVARAFVVNGAVFSAYEIALRCLYNNNNIQAEETI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02240 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 288 IPR018108 -
Bva08g02240 301 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Bva08g02240 301 Pfam Mitochondrial carrier protein 108 191 IPR018108 -
Bva08g02240 301 Pfam Mitochondrial carrier protein 206 292 IPR018108 -
Bva08g02240 301 Gene3D Mitochondrial carrier domain 9 299 IPR023395 -
Bva08g02240 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 101 190 IPR018108 -
Bva08g02240 301 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 291 - -
Bva08g02240 301 PRINTS Mitochondrial carrier protein signature 116 134 IPR002067 GO:0055085
Bva08g02240 301 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085
Bva08g02240 301 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Bva08g02240 301 PRINTS Mitochondrial carrier protein signature 210 232 IPR002067 GO:0055085
Bva08g02240 301 SUPERFAMILY Mitochondrial carrier 11 283 IPR023395 -
Bva08g02240 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Bva08g02240 301 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02240 Bva-Chr8 14613391 14614901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02240 1 293 Antiporters AT1G79900 68.581 6.49e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02240 K15109 - rcu:8274512 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02240 08 14613391 14614901 Bva08g02240 08 14613391 14614901 ECH