Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02233 ATGTCGTTACTTTCTCCGGAGGCCTCTCCGGGAACTAATTCCACCACTGCTCCTCCGCCCCCCGTTCCTGCAGCCAATGATACTTCTCCTCCGCCACCCGTAACCACTAATACTTCAAATTCTCCGAATAACTCGAATACGCCGTCGTCGAGTCCGCAGCCCTCTAATGGAGGATTGGTCGGTTTAATTGTTGGGACTGTGTTTGGTGGGTTGCTTATGTTGTTAATTGTGGGGATTTGCGCCTTTttctgcaaaagaaagaagttgaGAAGGAAGAAACGCTATGGGTTGGAGGACTACCCTGGTGGTGCTCCACAAGGACCGAAAGCTGACCAGTTTGGTGGTGGACCTCAGAACTGGCAACCATATATTCGTCCTCCCTCGGATGATATAGGAACATTGCCTCCAAAACCAACTCCATCTTTGGGAGTTGGACCAAAGCAGAAATTTTCACCCACTAATGCCCCTTCTCCCCCTGTGGATTCATCAACCAGCAATAGTTTGGGGTCTGAGAGGCCACGTCATTCACCATCTCCTAGCATTGCCTTGGGACTATCACAAAGCATATTTACATATGACGAATTAGCAATGGCAACAAATGGATTTTCCAACTCGAATCTTGTTGGTCAAGGTGGTTTTGGCAATGTCTATAAAGGGGTCCTCGGAAATGGAAAAACTGTTGCGGTTAAGCAACTGAAATCTGGAAGTTTACAGGGGGAGCGTGAATTCCAGGCAGAAGTTGAGATCATCAGCCGTGTCCATCATAGACATCTCGTTTCCCTAGTTGGATACTGCATGGCTGGGACCCAGAGGATGCTTGTTTATGAGTTTCTCCCTAATAATACTCTGGAGTTTCATTTGCATGGAAAAGACAGACCAACTATGGATTGGTCAACAAGGATGAAGATTGCTATTGGATCTGCAAAAGGATTGGCATATCTACACGAGGATTgTCAGCCCAAAATTATACACCGTGACATCAAGGCATCTAACATTCTTCttgatgataattttgagTCAAAGGTTGCAGATTTTGGACTTGCTAAATTTTCGCCAGATGCTAACACTCATGTTTCTACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCAGAATATGCTAGTAGTGGAAAACTCACTGATAAGTCAGACGTCTTCTCCTTTGGCGTTGTACTTTTGGAGTTGATTACTGGGCGAAAACCCGTTGATAGAGATGAGTCTTTCCCTGATGATAGCATGGTTGAATGGGCAAGACCTTTACTCTCCCAAGCTTTGGAAAATGGCAGCCTTGAACCACTTGCTGATCCGAGGTTGCAGAAGAATTACAACTCTGATGAGATGATTCGAATGGTTGCTTGTGCAGCAACTTGTGTGCGAAATTCAGCCAGGCGTCGCCCTCAAATGAGCCAGGTTGTTCGAGCTCTAGAAGGAAATATTTCCCTGGATGATCTAAATGAGGGGATCGCAGCTGGGCACAGCAGAGCGTTTGGTTCCTTTGAAAGCTCAAGTTATGATACTGCCCAATACAAAATAGACATAGAGAACTGCAGAAAGCTTGCTCTGGGAGGCCAAGAGGAAGGTACCAGTGAATACGGTGGCCCCAGCAGCGAGTACGGTCAACATACGTCTAGCTCAAGCAGTGATGTCCAGCAAAATTCGCAAGTGACAGACATGGAAAGTAAGAAGAGCAGTACCCAAGCTTCGTCATTTCGATA 1715 0.4542 MSLLSPEASPGTNSTTAPPPPVPAANDTSPPPPVTTNTSNSPNNSNTPSSSPQPSNGGLVGLIVGTVFGGLLMLLIVGICAFFCKRKKLRRKKRYGLEDYPGGAPQGPKADQFGGGPQNWQPYIRPPSDDIGTLPPKPTPSLGVGPKQKFSPTNAPSPPVDSSTSNSLGSERPRHSPSPSIALGLSQSIFTYDELAMATNGFSNSNLVGQGGFGNVYKGVLGNGKTVAVKQLKSGSLQGEREFQAEVEIISRVHHRHLVSLVGYCMAGTQRMLVYEFLPNNTLEFHLHGKDRPTMDWSTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKASNILLDDNFESKVADFGLAKFSPDANTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVVLLELITGRKPVDRDESFPDDSMVEWARPLLSQALENGSLEPLADPRLQKNYNSDEMIRMVACAATCVRNSARRRPQMSQVVRALEGNISLDDLNEGIAAGHSRAFGSFESSSYDTAQYKIDIENCRKLALGGQEEGTSEYGGPSSEYGQHTSSSSSDVQQNSQVTDMESKKSSTQASSFR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02233 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Bva08g02233 571 MobiDBLite consensus disorder prediction 523 571 - -
Bva08g02233 571 Pfam Protein tyrosine and serine/threonine kinase 206 475 IPR001245 GO:0004672|GO:0006468
Bva08g02233 571 Gene3D Phosphorylase Kinase; domain 1 178 277 - -
Bva08g02233 571 MobiDBLite consensus disorder prediction 1 55 - -
Bva08g02233 571 MobiDBLite consensus disorder prediction 13 30 - -
Bva08g02233 571 CDD STKc_IRAK 208 477 - -
Bva08g02233 571 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 546 - -
Bva08g02233 571 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Bva08g02233 571 MobiDBLite consensus disorder prediction 31 55 - -
Bva08g02233 571 MobiDBLite consensus disorder prediction 529 571 - -
Bva08g02233 571 MobiDBLite consensus disorder prediction 146 180 - -
Bva08g02233 571 MobiDBLite consensus disorder prediction 97 180 - -
Bva08g02233 571 ProSiteProfiles Protein kinase domain profile. 202 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02233 571 SMART serkin_6 202 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02233 571 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 546 - -
Bva08g02233 571 SUPERFAMILY Protein kinase-like (PK-like) 174 475 IPR011009 -
Bva08g02233 571 Gene3D Transferase(Phosphotransferase) domain 1 278 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02233 Bva-Chr8 14584886 14589235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02233 24 522 Trihelix Transcription Factor Family AT1G70460 49.318 1.60e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva08g02233 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02233 - - aip:107617256 667.922