Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02224 ATGGGCGTGGACATGTCGAAAAACCCACCTCCCACTTCTCACACTAAAGACTTCTTTGCCTCTCCAGCTCTCTCTCTTAGTCTTGCTGGAATCTTTCGCCATGCTGGGGCGGCGGTGCCGACAACGTCGGTGGCGACGGCGAACATGTCGGTGGAGGAAGGGGATGAGGGAAGTGGAGGAGGTGGTCGGCGAGAAGATACGGTTGAGATTAGCAGCGAGAACTCGGGCCCAGCTAGATCGAGATCAGACGATGAATTATTTGAAGGAGACGGAGAGCATGAAGAAGACGACGGTGATGGagacaagaacaagaaaaagaagaggaagaagtaCCACAGGCACACTGCTGAACAGATCAGAGAAATGGAAGCACTTTTCAAAGAGTCACCACATCCTGATGAGAAACAAAGGCAACAACTAAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCTATACAAGAACGTCATGAAAATTCTCTGCTAAAGACAGAAATTGAGAAACTTAGAGAGGAGAATAAGGCCATGAGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGCACGGCCACCACTAGCAGAGATGCAGCAATGTCCACAGAAGAACAGCAACTACGTATTGAAAACGCCAAACTCAAAGCTGAGGTGGAGAAGCTCCGAGCAGCTTTAGGGAAGTATCCACCGGGGAAAACCTCGCCTTCCTGTTCTTCCGGCAATGACCAAGAGAATAGAAGCTCTTTGGATTTTTACACTGGAATTTTTGGGCTTGAGAAGTCAAGGATCATGGAGATAGTTAACCAAGCAATGGAGGAGCTCATAAAAATGGCTACTGTGGGGGAACCATTATGGGTTCGTAGCGTTGAGACTGGTCGTGAAATACTTAACTATGATGAATATATCAAAGAGTTCTCTGCTGAAAATTCAAGCAATCTAAGGCCAAAGATATCCATTGAAGCCTCAAGAGAAACTGGGGTCGTTTTCGTGGACCTGCCAAGGCTTGTCCAGAATTTTATGGACATGAATCAATGGAAGGAAATGTTTCCATGCTTGATATCAAAGGCAGCAACCGTTGATGTTATATGCAGCGGAGAAGGTGCAAACAAAAATGGCGCGGTGCAACTGATGTTTGCTGAGTTGCAGATGCTCACACCCACCGTGTCCACCAGGGAAGTGTACTTTGTCCGATACTGCAAGCAATTGAATGCTGAGCAGTGGGCAATTGTCGATGTATCCATTGATAAAGTAGAAGCCAATATCGACGCATCCCTCGTGAAATGCAGAAAACGACCATCTGGTTGCATTATCGAGGACAAGTCAAATGGCCATTGCAAGGTAATCTGGGTGGAGCACTTAGAATGCCAGAAAAGCGCGGTTCACGCGATGTATCGGACCGTGGTCAACAGTGGTCTTGCATTTGGGGCAAAGCACTGGATTGCAACGCTGCAACTTCAATGCGAGCGTCTAGTTTTCTTCGTGGCGACAAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGAAGGAAAAGCATTTTGAAATTGGCACAAAGAATGACATGCAGTTTCTGCCACGCACTGGGCGCTTCAAGCTTCCATACATGGAACAAAGTCACAAGCAAAACAGGAGAAGATATCAGAATAAGTTCTAGGAAGAACTTGAACGATCCTGGAGAACCTCTTGGTGTCATCTTGTGCGCAGTTTCTTCTGTATGGTTGCCTGTGTCTCCGAGTGTTCTGTTTGATTTCTTGAGGGATGACAGCCGCCGCACCGAGTGGGATATCATGTCCAATGGGGGATCAGTACAATCCATTGCAAACCTAGCCAAAGGACAAGATAGGGGCAATGCAGTAACCATACAAacaatcaaatcaaaagaaaacaacagtATATGGATACTGCAAGATAGCTGCACCAATGCTTACGAATCAATGGTGATCTATGCTCCCGTGGACATTACTGGTATGCAGGCTGTGATGACAGGTTGTGATTCAAGCAATCTTGCTATACTGCCCTCAGGATTCTCAATTCTTCCTGATGGAGTAGAGACAAGGCCATTGGTAATTACTTCGAGGCAGGAAGAGAAAAGCACAGAAGGAGGATCTTTATTCACAATAGCATTCCAGATCGTTACGAATACATCACCAACAGCTAAGCTAACTATGGAGTCTGTGGAATCAGTCAACACTCTTATATCTTGTACATTAAGAAATATCAGAACAAGTTTACAATGTGAGGATAGTTA 2288 0.4493 MGVDMSKNPPPTSHTKDFFASPALSLSLAGIFRHAGAAVPTTSVATANMSVEEGDEGSGGGGRREDTVEISSENSGPARSRSDDELFEGDGEHEEDDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLREENKAMRETINKACCPNCGTATTSRDAAMSTEEQQLRIENAKLKAEVEKLRAALGKYPPGKTSPSCSSGNDQENRSSLDFYTGIFGLEKSRIMEIVNQAMEELIKMATVGEPLWVRSVETGREILNYDEYIKEFSAENSSNLRPKISIEASRETGVVFVDLPRLVQNFMDMNQWKEMFPCLISKAATVDVICSGEGANKNGAVQLMFAELQMLTPTVSTREVYFVRYCKQLNAEQWAIVDVSIDKVEANIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHAMYRTVVNSGLAFGAKHWIATLQLQCERLVFFVATNVPMKDSTGVATLAGRKSILKLAQRMTCSFCHALGASSFHTWNKVTSKTGEDIRISSRKNLNDPGEPLGVILCAVSSVWLPVSPSVLFDFLRDDSRRTEWDIMSNGGSVQSIANLAKGQDRGNAVTIQTIKSKENNSIWILQDSCTNAYESMVIYAPVDITGMQAVMTGCDSSNLAILPSGFSILPDGVETRPLVITSRQEEKSTEGGSLFTIAFQIVTNTSPTAKLTMESVESVNTLISCTLRNIRTSLQCEDS 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02224 762 CDD homeodomain 112 163 IPR001356 GO:0003677
Bva08g02224 762 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 760 IPR042160 -
Bva08g02224 762 SMART HOX_1 107 169 IPR001356 GO:0003677
Bva08g02224 762 SUPERFAMILY Bet v1-like 269 500 - -
Bva08g02224 762 SUPERFAMILY Homeodomain-like 96 166 IPR009057 -
Bva08g02224 762 SMART START_1 276 500 IPR002913 GO:0008289
Bva08g02224 762 Coils Coil 215 235 - -
Bva08g02224 762 Gene3D - 94 178 - -
Bva08g02224 762 Pfam START domain 277 500 IPR002913 GO:0008289
Bva08g02224 762 ProSiteProfiles START domain profile. 267 503 IPR002913 GO:0008289
Bva08g02224 762 Pfam Homeodomain 108 163 IPR001356 GO:0003677
Bva08g02224 762 MobiDBLite consensus disorder prediction 43 116 - -
Bva08g02224 762 CDD START_ArGLABRA2_like 271 499 - -
Bva08g02224 762 Gene3D - 275 497 IPR023393 -
Bva08g02224 762 SUPERFAMILY Bet v1-like 543 743 - -
Bva08g02224 762 Coils Coil 164 191 - -
Bva08g02224 762 ProSitePatterns 'Homeobox' domain signature. 140 163 IPR017970 GO:0000981|GO:0006355
Bva08g02224 762 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 18 760 - -
Bva08g02224 762 ProSiteProfiles 'Homeobox' domain profile. 105 165 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02224 Bva-Chr8 14556419 14561672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02224 70 761 Homeobox Transcription Factor Family AT1G79840 66.145 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva08g02224 START 7e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02224 K09338 - qsu:111988083 1273.84