Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02215 ATGATGGCTGGTAACCCTAACTGGTGGAGCATGCATATGCATCCACCCTCTCTGGTCCCTCCCCAGTATGTGCTTGGATCTTCTTCAATTCCTTTCAATTCTTTGACAGAGAACCCAGACCCTCCAGCTCACTCATGGAGCCAACTGCTCCTCTCGGGGTTTccaggagaagaagaaagattggGGTTGACTCATTTTCAACCAAAGAAGTTGGAAATTTGGGATGACCAAGCTGTTCATCCATCCTCAAGATCACTTAATGCTACTACTCTTGATGTGATAAAGCAAGGGACTTCCCAAAGTGGCAACTTGTACGGTCATGGCCATGAAGATTTTCATTCTTCTGGACCAGCTGGGTCGTCTTGGCCAAACCCACACATGGTGCCTGCAGTTTCTTCCCCTAGGTCCTGTGTCACTACCAATAATATATTGGATTTCGCTTATAACAAGGCTGATCATAAGAAGCATCAACTACCAGATCATCATACACTTGAGTGTAATAGCACATCTGCTGCTGGAGTTTGTAAGAAAGCTAGGGTTCAACCATCTTCAAGCCAACCACCTTTCAAGGTGAGAAAGGAGAAGCTAGGAGATAGAATAACAACACTTCATCAGCTAGTCTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATCAGATTCCTCCAGGGTCAAATTGAGGCACTCAGCTCCCCTTACTTGGGCAATGCATCAAAAAACAGGAATCAACAATCTGTACACGTAGCTGAAAGGAGTTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGgcctgaaaagaaaaggagctccAACCCAGGGTGCAGTAGATAATCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTGCCTGTGTCTTCCACCCAGCATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCGGCGTATGGCAGCGGATTTTG 977 0.4432 MMAGNPNWWSMHMHPPSLVPPQYVLGSSSIPFNSLTENPDPPAHSWSQLLLSGFPGEEERLGLTHFQPKKLEIWDDQAVHPSSRSLNATTLDVIKQGTSQSGNLYGHGHEDFHSSGPAGSSWPNPHMVPAVSSPRSCVTTNNILDFAYNKADHKKHQLPDHHTLECNSTSAAGVCKKARVQPSSSQPPFKVRKEKLGDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNASKNRNQQSVHVAERSSVFPEDPGQLLNDNGLKRKGAPTQGAVDNPKDLRSRGLCLVPVSSTQHVGSENGADYWAPAYGSGF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02215 325 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 311 - -
Bva08g02215 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 180 229 IPR011598 GO:0046983
Bva08g02215 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 241 IPR036638 GO:0046983
Bva08g02215 325 CDD bHLH_AtbHLH_like 187 237 IPR045239 -
Bva08g02215 325 MobiDBLite consensus disorder prediction 258 290 - -
Bva08g02215 325 Gene3D - 190 254 IPR036638 GO:0046983
Bva08g02215 325 PANTHER OS05G0228400 PROTEIN 7 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02215 Bva-Chr8 14513341 14516548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02215 56 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.444 1.22e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02215 - - gmx:100802121 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02215 08 14513341 14516548 Bva08g02215 08 14513341 14516548 ECH