Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02213 ATGTCTACACCATTAGAACATGATTACATAGGCCTAGCAGAGCACCCGTCCATGGAAAGAAGCTCCGAGAAAATCCCCTCTTCTGTTTCCTCCACCCTCTCCTCTGAGGATGAAAAGAGCTCTTCTTTGAACTTCAAGGAAACAGAGCTCAGGCTTGGCCTCCCTGGTTGCAAGTCTCCAGAGAGAAAACCAGCAACCGGTGTCTCTCTTTTTGGAAAGGAGTTGCAGAATGGGTGTTCTTCTgcaaaccctttgaagaatcTTGTCTCTGGTGCCAAGAGGGGATTTTCTGATGCTATTGATGGGTCTTCTGGGAAATGGGTTTTCTCTGTGAATGATGGATCTGAGGTTGATTTGGGAAAAGGTGCTGCCTTGTTCTCTCCCAGCGGTGCAAATGGTGGGAAGCCTCTTCTGGGTTTAGAGGCTAAAAATAATAGCCAGCATGGCTCTACTTCTACCCCTGCTCAGAGCATTAAAGAGGTGGGAATAACTACTCAGACTGCAAAACCAACCCTGGAGAAGAAGCCACAGGTTCCTGCTCCTAATGAGCATGTTGCTACTCCTGCTGCGAAGGCACAGGTTGTGGGATGGCCACCAATTAGATCTTTCCGAAAGAACTCCTTGGCCTGTAATGCATCAAAGAACAATGATGAAGGTGAAGGCAAAGCAGGGATCGGTTGTCTCTATGTAAAGGTTAGCATGGATGGTGCCCCATATCTGAGAAAGGTTGATCTGAAAACCTACAACAACTACGTGGAACTTTCTTCTGCTCTTGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAGTTCTCGTGGGCTTCCGGGGAAAGATGGACTTAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGCTCTGAATATGTTCTTACATATGAAGACAAAGATGGAGATTGGATGCTTGTTGGTGATGTACCCTGGGAAATGTTCACTGACTCATGCAGGAGGCTAAGGATCATGAAAGGTTCCGAGGCAATTGGGCTAGCTCCAAGGGTCGTGGAAAAATCCAGGAGCCAGATCTA 1043 0.464 MSTPLEHDYIGLAEHPSMERSSEKIPSSVSSTLSSEDEKSSSLNFKETELRLGLPGCKSPERKPATGVSLFGKELQNGCSSANPLKNLVSGAKRGFSDAIDGSSGKWVFSVNDGSEVDLGKGAALFSPSGANGGKPLLGLEAKNNSQHGSTSTPAQSIKEVGITTQTAKPTLEKKPQVPAPNEHVATPAAKAQVVGWPPIRSFRKNSLACNASKNNDEGEGKAGIGCLYVKVSMDGAPYLRKVDLKTYNNYVELSSALEKMFSCFTIGQCSSRGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRVVEKSRSQI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02213 347 SUPERFAMILY CAD & PB1 domains 228 328 - -
Bva08g02213 347 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 338 IPR003311 GO:0005634|GO:0006355
Bva08g02213 347 MobiDBLite consensus disorder prediction 22 39 - -
Bva08g02213 347 Gene3D - 222 341 - -
Bva08g02213 347 Pfam AUX/IAA family 47 338 IPR033389 -
Bva08g02213 347 ProSiteProfiles PB1 domain profile. 227 329 IPR000270 GO:0005515
Bva08g02213 347 PANTHER AUXIN-RESPONSIVE PROTEIN 7 338 - -
Bva08g02213 347 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02213 Bva-Chr8 14495505 14497906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02213 231 337 B3 DNA Binding Superfamily AT4G23980 30.841 2.56e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva08g02213 AUX_IAA 5.8e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02213 K14484 - jre:109000692 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02213 08 14495505 14497906 Bva08g02213 08 14495505 14497906 ECH