Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02205 ATGACTGAATCAAGCTATTCCGAATCTGCTAACACTTGTAACTCTCCGCCTCCCTCGCCATCCTCGTCGCATTCTCTCCCAAACTCTTCCAAGAACGACGAAACAGAGCTCAAGGAAGAAAGCAGAGCCAAGAGACCCAGAGATTGTAACAGGCACCCAGTTTACCATGGCGTCCGAATGAGAAGTTGGGGCAAATGGGTGTCCGAAATTCGTCAACCCCGCAAGAAATCTCGTATCTGGCTTGGTACTTTTGCCACACCAGAAATGGCAGCACGTGCTCATGATGTTGCAGCTCTGAGCATTAAAGGTCAGTCAGCAATTCTCAACTTTCCACAAATAGTTGATATGCTTCCCAGACCAGTCACGTTAACCCCACGCGACATCCAAGCTGCTGCTACAGAAGCAGCAGCCATGGTTAAATTCGACCCAGTAGTACAAtcagattcttcttcttcgtcttcGCCGCCATCACCACCTCAATCATCATCACACCAATCGGAGTCCTCGGAGCTGAGCGAGATAGTGGAATTGCCCAATGTAGAGGAGAGCTTCGATTCAGTGGACTCGAGAACCGAGTTTACACTTATTGACTCAGTGGATAGTTGGGTGTATCCGGCAGTGGGGTTAGAGGAAATTGAATACTCTGCTTATTTTTCTGAGCAATTATTCCCACAAGAGAATTTCAATACAAGTAGCTATGAGATAGGAGTATCACTTTGGGAATA 725 0.4579 MTESSYSESANTCNSPPPSPSSSHSLPNSSKNDETELKEESRAKRPRDCNRHPVYHGVRMRSWGKWVSEIRQPRKKSRIWLGTFATPEMAARAHDVAALSIKGQSAILNFPQIVDMLPRPVTLTPRDIQAAATEAAAMVKFDPVVQSDSSSSSSPPSPPQSSSHQSESSELSEIVELPNVEESFDSVDSRTEFTLIDSVDSWVYPAVGLEEIEYSAYFSEQLFPQENFNTSSYEIGVSLWE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02205 241 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Bva08g02205 241 MobiDBLite consensus disorder prediction 144 172 - -
Bva08g02205 241 MobiDBLite consensus disorder prediction 1 30 - -
Bva08g02205 241 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Bva08g02205 241 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Bva08g02205 241 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 206 - -
Bva08g02205 241 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Bva08g02205 241 CDD AP2 55 111 IPR001471 GO:0003700|GO:0006355
Bva08g02205 241 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Bva08g02205 241 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Bva08g02205 241 MobiDBLite consensus disorder prediction 1 53 - -
Bva08g02205 241 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Bva08g02205 241 MobiDBLite consensus disorder prediction 31 53 - -
Bva08g02205 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02205 Bva-Chr8 14460762 14461838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02205 1 205 AP2-EREBP Transcription Factor Family AT5G11590 52.778 5.76e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva08g02205 AP2 3.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02205 K09286 - gmx:100801780 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02205 08 14460762 14461838 Bva08g02205 08 14460762 14461838 ECH