Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02195 ATGGATGAATTTGATAGTGGAGCTCGGAGCAAAGATAAAGGCAATGCTGCTGAAGATGAAGGTAGCACGGCTCCACTTCCGGAAAAGGTTCAAGTAGGTGGATCTCCTATGtataaattagaaagaaaactgGGCAAGGGCGGATTTGGTCAAGTATATGTTGGCCGACGAATTTCTGGTGTTAATTTGAGTGAGAGAACAGGACCTGGAGCTGCGGAGGTTGCTTTAAAATTCGAGCACAGAAGTAGTAAAGGATGTAACTATGGACCACCCCACGAGTGGCAAGTGTACAATACACTTGGTGGCAGTCATGGTGTGCCACGAGTACACTACAAGGGCAGGCAAGGCGACTATTATGTCATGGTTATGGATATGCTGGGACCTAGTTTGTGGGATGTTTGgaataataacttaaatcaCGCAATGTCCACTGAAATGGTTGCGTGTATCGCCATTGAAGCTATATCCATACTGGAGAAGATGCACTCAAGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCCGGAACACCTGATGAGAAAAAATTGTTCCTTGTTGATCTTGGATTAGCTACTAGATGGCGGGACACTTCAACAGGATTGCATGTGGAATACGACCAAAGGCCAGATGTTTTCAGGGGAACAGTGCGGTATGCTAGTGTGCATGCACATTTAGGTAGAACTGGCAGCAGGAGGGATGATCTAGAATCTCTTGCATACACATTGATTTTCCTTCTTCGGGGTCGTCTCCCTTGGCAGGGGTTCCAGGGTGAGAACAAAGGGTTCCTTGTTTGCAAGAAGAAGATGGGAACTTCTCCAGAGAGCCTATGTTGCTTCTGCCCCCAGCCTTTCAGGCAGTTTGTGGAACATGTTGTGAACTTGAAGTTTGATGAAGAACCTAATTATGCCAAATATATTTCTCTATTTGATGGGATAGTGGGGCCAAATCCAGATACCAGGCCAATTAATACAGAGGGCGCACAGAAGCTCATTGGTCATAAGAGAGGTCGGTTGGCTATGGAAGATGACGATGATgaacaaccaaaaaagaagattcGTATGGGTATGCCAGCAACTCAGTGGATAAGCATTTACAATGCCCGCAGACCAATGAAACAAAGGTATCACTACAATGTGGCAGATTCAAGGCTATCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTATATATCAGCAGCGTGGCTTCATGTCAGAACCTGTGGGCCTTAATCATGGATGCAGGCACTGGTTTCACACACCAAGTCTATGAACTGTCTCCTTCCTTTCTCCACAAGGAATGGATAATGGAGCagtgggaaaaaaattactatatcaGTGCGATTGCTGGAGCTACCAATGGAAGCTCCTTAGTAGTGATGTCCAAGGGAACACAGTATTTGCAGCAATCTTACAAAGTTAGTGattcatttccttttaagTGGATTAACAAAAAATGGAGGGAGGGATTTTATGTTACAGCAATGGCCACCTCAGGAAGTAGATGGGGGGTAGTCATGTCACGTGGTGCAGGATTTTCCGACCAGGTGGTTGAATTAGATTTTCTCTATCCCAGTGAAGGAATTCACAAGCGGTGGGATTGTGGATACCGTATCACGGCAACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTCAGTATACCAAGGAGGAAGCCTTTAGATGAAACACAGGAAACTCTTAGAACTTCTGCTTTTCCGAGTACACATGTCAAGGAAAAGTGGGCAAAGAACCTCTATATTGCATCTGCTTGCTATGGACGAACAGTTTCTTA 1811 0.4357 MDEFDSGARSKDKGNAAEDEGSTAPLPEKVQVGGSPMYKLERKLGKGGFGQVYVGRRISGVNLSERTGPGAAEVALKFEHRSSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNLNHAMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDTSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPESLCCFCPQPFRQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDTRPINTEGAQKLIGHKRGRLAMEDDDDEQPKKKIRMGMPATQWISIYNARRPMKQRYHYNVADSRLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFTHQVYELSPSFLHKEWIMEQWEKNYYISAIAGATNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATSGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITATAATWDQAAFVLSIPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASACYGRTVS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02195 603 Pfam Protein kinase domain 38 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02195 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Bva08g02195 603 ProSitePatterns Protein kinases ATP-binding region signature. 44 77 IPR017441 GO:0005524
Bva08g02195 603 MobiDBLite consensus disorder prediction 1 33 - -
Bva08g02195 603 Gene3D Transferase(Phosphotransferase) domain 1 5 360 - -
Bva08g02195 603 CDD STKc_CK1 37 315 - -
Bva08g02195 603 MobiDBLite consensus disorder prediction 1 18 - -
Bva08g02195 603 SUPERFAMILY Protein kinase-like (PK-like) 38 321 IPR011009 -
Bva08g02195 603 ProSiteProfiles Protein kinase domain profile. 38 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02195 603 SMART serkin_6 38 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02195 603 PANTHER CASEIN KINASE-RELATED 15 577 - -
Bva08g02195 603 PANTHER - 15 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02195 Bva-Chr8 14411581 14416408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02195 43 315 MAP Kinase Kinase Kinase AT5G50180 23.860 1.73e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bva08g02195 Pkinase 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02195 - - mnt:21394019 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02195 08 14411581 14416408 Bva02g02363 02 23138102 23143834 ECH
Bva08g02195 08 14411581 14416408 Bva08g02195 08 14411581 14416408 ECH