Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02191 ATGACTCGGCGGTGCTCTCAATGTAGCAACAACGGGCACAACTCCCGAACATGCCCGTCTCGTAGTGGTGGCGTCAAGCTCTTCGGCGTGAGACTCACCGATGGATCAATCATCAAGAAGAGCGCCAGCATGGGGAACCTTTCGGTCCATTACCATTCTTCTTCATCCGTCGCTGCGTCACCGAATCCCAGCTCCCCCAGCTCCGACCCTCTTCGTGAACCTGAAGGATACTTGTCCGATGACCCGGCCCATGCGTCCACTTCTGTGAACCGCcgtggagaaagaaaaaaggGTGTTCCATGGACTGAAGAAGAACATCGGCAATTCTTAATTGGTCTCCATAAACTGGGAAAAGGAGACTGGCGTGGCATAGCACGCAATTTTGTGGTGACAAGGACCCCTACTCAAGTAGCTAGCCATGCTCAGAAGTACTTTATTCGACAGAGTAACGCTACTCGGAGAAAGAGACGTTCTAGTCTTTTTGACATGGTTCCAGATGTGGCTTCAGATCCACCTTCTGTGCCAGAAGAACAAGCTTTACTGCCACGTTCTGAAAAAGTACAACCCAGTAATGCAATATCACAGCCATCATTAAATCTCTCTCTGAAGTCGGAGTATGACCCCATGGAAACTACTTCTCAAGAAAATGTAGAAAAGCCTAATGAAGCTGTGATGAGGTCAAGTGGATTGACACCAATGGCTCCAGGATTCTCTCCAGCTTATGTACCTGTCCCATTAACAATATGGCATCAAACACTGCTCGCTTGGAAGAATTTAACAGAGCAGAGGTATCTCATCATCATGTACTCAAGCCAATTCCAGTTATTCCGAATGAACCTGTCAATGTCGACGAATTTGTTGGCATATCTCAGTTG 875 0.4686 MTRRCSQCSNNGHNSRTCPSRSGGVKLFGVRLTDGSIIKKSASMGNLSVHYHSSSSVAASPNPSSPSSDPLREPEGYLSDDPAHASTSVNRRGERKKGVPWTEEEHRQFLIGLHKLGKGDWRGIARNFVVTRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPDVASDPPSVPEEQALLPRSEKVQPSNAISQPSLNLSLKSEYDPMETTSQENVEKPNEAVMRSSGLTPMAPGFSPAYVPVPLTIWHQTLLAWKNLTEQRYLIIMYSSQFQLFRMNLSMSTNLLAYLS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02191 291 MobiDBLite consensus disorder prediction 1 25 - -
Bva08g02191 291 CDD SANT 100 145 IPR001005 -
Bva08g02191 291 Pfam Myb-like DNA-binding domain 100 145 IPR001005 -
Bva08g02191 291 PANTHER OS01G0187900 PROTEIN 1 237 - -
Bva08g02191 291 Gene3D - 99 150 - -
Bva08g02191 291 SMART sant 97 147 IPR001005 -
Bva08g02191 291 PANTHER TRANSCRIPTION FACTOR KUA1 1 237 - -
Bva08g02191 291 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Bva08g02191 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 148 IPR006447 GO:0003677
Bva08g02191 291 MobiDBLite consensus disorder prediction 1 21 - -
Bva08g02191 291 ProSiteProfiles SANT domain profile. 101 149 IPR017884 -
Bva08g02191 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 149 IPR017930 -
Bva08g02191 291 ProSiteProfiles Myb-like domain profile. 93 145 IPR001005 -
Bva08g02191 291 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Bva08g02191 291 MobiDBLite consensus disorder prediction 54 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02191 Bva-Chr8 14379347 14382436 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva08g02191 Myb_DNA-binding 1.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02191 - - gmx:778036 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02191 08 14379347 14382436 Bva08g02191 08 14379347 14382436 ECH