Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02188 ATGAATCTTGTACGGAAACCCCAATTGAAGTTGCTgtactttcttctctttctgctTTACCTTCGCTCCCTCTGTTCTTACCCAACACCCACGGGCTGTACGGACACAACCCGCTTGTGCACCTCTTTCTTAGCCTTTAAGCCTCAGCCGGACCAGACACTGGCTGTCTTACAGAGCATGTTCGATGTGCTGCCCAACGATGTCACTGTTGAAGGGAATGGCTGGGGTTACGTATTTATCAGGAAGAACTGTTCTTGTGCTGCTGGTGCAAAGAAATATGTTACTAACACCACCTTCACTGTAAAATCCAACGTAGGATATGTCTATGACTTGGTAATGGACGCCTACGATGGGCTTGCTTTGTTACCCAACACGACCCGCAAGGCAAAAAATGGTTCTGTGATATCATTGAGTTTGTTTTGTGGATGCTCCAGCGGTCTATGGAATTATTTGTTGAGTTATGTCATGAGAGATGGTGACAGTATTGGATCTTTCGCGAGTCGTTTTGGCGTTAGTATGGATAGCATTGAGAATGTAAATGGCATCAACAATCCGGATAACATTACTGTTGGTTCTTTGTATTATATACCTCTAGATTCAGTTCCCGGTGAGCCATATCCCCTGAAGAATGATACTGCTTCAGCTCCTGTTCTCGCTCCATCTGCTGATAATTTTTCAGCTAATGAAGTTACTCATAAGGCTCACGTACCTTATCGATGGATTATTGTGGGTTTAGGGGTTGGCCTTGCTCTGATAATACTAAGCATAATTCTTTATGTTTCTCTGAGGTCATCAAATTGTTTTGCTGAAGCCAGAAGGAGTCACGCAAAAGATGATGATAGCAAGATCTCTCATAACTTTCATATTCTTCGGAACCCAACTTTCTTTTGTGGTTCAGGAAGGTACTTATGTGGAAAACCTGTAGAGCAGAAGCAAACTGACGATGAATCCAGCAACCATCAGCCAACCATTCCAAAAGTTTCAACTTTAGGGGCTGATGTATTTGACGTGGATAAGCCTGAAGTTTTCACATATGAAGATATCTTCTCCTCCACTGATGGTTTCTCTGATTCGAGTCTACTTGGGCACGGAACATATGGTTCTGTTTATTATAGCCTCCTTCGTGAGCAGGAAGTTGCTATTAAAAGAATGACTGCTACAAAATCTAAAGAATTTATGTCAGAGATGAAAGTCCTCTGCAAGGTTCATCATTCAAACCTGGTAGAATTGATCGGTTATGCAGCTAGTCATGATGAGCTGTTCCTTATTTATGAATATGCCCAAAAGGGTTCACTGAAAAGTCATCTGCACGATCCTCAGAATAAGGGACATTCTCCACTTTCTTGGATCATGAGGGTCCAGATTGCACTTGATGCTGCAAGGGGCCTCGAATACATACACGAACACACTAAAACTCATTATGTCCATCGAGATATCAAGACAAGCAACATCTTGCTTGATGCTTCTTTCAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGAAAACAAACGAAGGAGAAATTTCTACGACCAAAGTTGTTGGCACGTATGGTTATCTTGCCCGAGAATACTTgagtaatggtcttgcaacGACCAAAAGTGATGTCTACGCATTTGGCGTTGTTCTGTTTGAGATTATTTCTGGGAAGGAGGCCATTATTCGAACAGAGGGCACGACTAAAAATCCCGAAAGACGTTCACTGGCGTCTATTATGCTGGTTGCACTTAGAAACTCGCCTGATTCCAAGAGTATGTCAAGCTTGAGAGATTATATTGACCCTAATATGATGGATTTGTATCCGCATGATTGTGTATTTAAGATGGGCATGCTGGCAAAACAATGCGTGGATGATGATCCCCTCCTACGACCTGATATGAAACAAGTTGTGATTTCCCTGTCTCAGATCCTCTTATCTTCTGTTGAATGGGAGGCCACTCTAGCTGGTAACAGCCAGGTATTCAGTGGGCTTGTTCAAGGAAGATA 1994 0.4173 MNLVRKPQLKLLYFLLFLLYLRSLCSYPTPTGCTDTTRLCTSFLAFKPQPDQTLAVLQSMFDVLPNDVTVEGNGWGYVFIRKNCSCAAGAKKYVTNTTFTVKSNVGYVYDLVMDAYDGLALLPNTTRKAKNGSVISLSLFCGCSSGLWNYLLSYVMRDGDSIGSFASRFGVSMDSIENVNGINNPDNITVGSLYYIPLDSVPGEPYPLKNDTASAPVLAPSADNFSANEVTHKAHVPYRWIIVGLGVGLALIILSIILYVSLRSSNCFAEARRSHAKDDDSKISHNFHILRNPTFFCGSGRYLCGKPVEQKQTDDESSNHQPTIPKVSTLGADVFDVDKPEVFTYEDIFSSTDGFSDSSLLGHGTYGSVYYSLLREQEVAIKRMTATKSKEFMSEMKVLCKVHHSNLVELIGYAASHDELFLIYEYAQKGSLKSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKTNEGEISTTKVVGTYGYLAREYLSNGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTTKNPERRSLASIMLVALRNSPDSKSMSSLRDYIDPNMMDLYPHDCVFKMGMLAKQCVDDDPLLRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02188 664 Gene3D LysM domain 152 202 IPR036779 -
Bva08g02188 664 Pfam LysM domain 154 192 IPR018392 -
Bva08g02188 664 SMART LysM_2 153 197 IPR018392 -
Bva08g02188 664 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Bva08g02188 664 Pfam Protein tyrosine and serine/threonine kinase 360 634 IPR001245 GO:0004672|GO:0006468
Bva08g02188 664 ProSiteProfiles Protein kinase domain profile. 355 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02188 664 CDD LysM 153 196 IPR018392 -
Bva08g02188 664 PANTHER BNAA06G02020D PROTEIN 33 664 - -
Bva08g02188 664 SUPERFAMILY Protein kinase-like (PK-like) 337 636 IPR011009 -
Bva08g02188 664 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Bva08g02188 664 Gene3D Transferase(Phosphotransferase) domain 1 428 651 - -
Bva08g02188 664 Gene3D Phosphorylase Kinase; domain 1 328 426 - -
Bva08g02188 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Bva08g02188 664 SMART serkin_6 355 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02188 664 SUPERFAMILY LysM domain 153 197 IPR036779 -
Bva08g02188 664 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 33 664 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02188 Bva-Chr8 14363982 14368175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02188 30 664 Receptor kinase-like Gene Family AT1G51940 68.012 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva08g02188 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02188 - - gmx:100796989 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02188 08 14363982 14368175 Bva02g02353 02 23068431 23073965 BWGD
Bva08g02188 08 14363982 14368175 Bva08g02188 08 14363982 14368175 ECH