Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02187 ATGGATACAAGGTCTCAGCTGTTAGATTTAATCCCGAAAAACAGAGAGTGGCTCACGAACagagatgaagaaagaagCCACAAATCTTCAGAGGAGAGGAAACTTGAGCTCAGGCTTGGCCCTCCAGGTGAAGACTGGTCTATTGATGATggtaagagagaaagagatgtgtctcttctttctctcggTTACTTCACAACCCAGAAGAACACCAACAATGGGTGCCAAACCCAAAAAATTTCCACCTCTGAAAACTCAGCTGGGGCTACTTTGTCTTCTCCATGGTGTCATAATCAGTATCAGGGAAAAGCATCACAATTTCTTCAATTCCAAACAAGCACACAGGGCATGCCTGTGATAGCAAAGGAGGCGTCACAAGCAGCAACCTGCTGCCCTAAAGTGGTAGATTTGCAGAATGCAGAGAAGAAAGCATTTTCGCCATCTTCTGCAAATACAGCTGTGCCCAGCAGCTCCCAGAAAAGAACTGCCCCTGGTCCAGTTGTGGGTTGGCCTCCAATTCGTTCATTTAGGAAGAACCGAGCAACCAGCATCACTTCTAAACCTTCTTCTGAGTCTCATCGTCAACATGTTGTTTCAGACAAGGTTGCCGGGAAAAAACCTATTGAAAACTCCACTAAAGGCCTTTTTGTGAAGATTAATATGGATGGAGTCCCAATTGGAAGAAAAGTGGATCTTAATGCTTACGACAGCTATGAAAAACTCTCTTCTGCTGTTGACGAACTCTTTAGAGGCCTCCTTGCAGCTCAAAGAGATTCCTCTGTCAGTGGAATTCAGAACAagcaagaagaagagaaagcgATCACAGGCTTATTGGATGGTAGTGGGGAATATACTCTTGTTTATGAGGACAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGCATCAACAGTGAAGAGGCTGCGTGTGTTGAAGAGTTCTGAGCTTTCTGCTTTGACCCTTGGTGGCAAGCAAGACAAGATGCCAGTTAACTCGCACTG 1016 0.4222 MDTRSQLLDLIPKNREWLTNRDEERSHKSSEERKLELRLGPPGEDWSIDDGKRERDVSLLSLGYFTTQKNTNNGCQTQKISTSENSAGATLSSPWCHNQYQGKASQFLQFQTSTQGMPVIAKEASQAATCCPKVVDLQNAEKKAFSPSSANTAVPSSSQKRTAPGPVVGWPPIRSFRKNRATSITSKPSSESHRQHVVSDKVAGKKPIENSTKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRGLLAAQRDSSVSGIQNKQEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFASTVKRLRVLKSSELSALTLGGKQDKMPVNSH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02187 338 MobiDBLite consensus disorder prediction 145 202 - -
Bva08g02187 338 ProSiteProfiles PB1 domain profile. 214 318 IPR000270 GO:0005515
Bva08g02187 338 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 7 331 - -
Bva08g02187 338 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 331 IPR003311 GO:0005634|GO:0006355
Bva08g02187 338 MobiDBLite consensus disorder prediction 145 163 - -
Bva08g02187 338 Pfam AUX/IAA family 35 324 IPR033389 -
Bva08g02187 338 MobiDBLite consensus disorder prediction 178 192 - -
Bva08g02187 338 MobiDBLite consensus disorder prediction 20 50 - -
Bva08g02187 338 Gene3D - 208 329 - -
Bva08g02187 338 SUPERFAMILY CAD & PB1 domains 210 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02187 Bva-Chr8 14351764 14355282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02187 218 329 B3 DNA Binding Superfamily AT4G23980 33.929 1.32e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva08g02187 AUX_IAA 1.3e-70 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02187 K14484 - qsu:111988286 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02187 08 14351764 14355282 Bva02g02352 02 23055636 23059291 BWGD
Bva08g02187 08 14351764 14355282 Bva02g02352 02 23055636 23059291 ECH
Bva08g02187 08 14351764 14355282 Bva08g02187 08 14351764 14355282 ECH