Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02186 ATGGGTAAGGCTACCAGATGGTTGAAGGGCTTGCTGGGGATAAAAACAGACAAACAGAAGGAGTACAGTGTAAATTCAGGTTCACTGGCTTCTGACAAGAAGGTTGAGAAGAAAAGGTGGAGTTTTGCTAAGTCGGGGAAGGATCCTGATGTGGATCAGAGTCCGGTGAGCATTGCAACCGGTGTTTCAGCATCTGATAATGCCTGGCTCAGATCCTATATGTctgaaacagagaaagagcAGAACAAGCATGCAATTGCGGTAGCTGCTGCCACCGCTGCCGCCGCTGATGCTGCTGTTGCCGCCGCACAGGCTGCTATGGCTGTTGTGAGGCTCACAAGCCATGGAAGGGGTACAATGTTCAATGGGGGCAGAGAAAGGTGGGCCGCAGTGAAGATTCAATCGGTCTTCAGAGGTTTCTTGGCTCGGAAGGCTCTTAGAGCACTGAAAGGATTGGTGAAGATACAAGCTCTTGTCAGAGGATTTCTAGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATTCGAGCTCAGGCCGCTGTTCGATCACAGCGTGCTCGTCGTTCCATCAGCAACGAAAACAGATTTCAACCCGAAATTCGTAGTCGAAGATCTCTGGAACGATTTGATGAAACAAGAAGCGAGTTTCATAGTAAAAGGGTCTCCACGTCTCATGAATCTGAAAGCccaaaaattgttgaaattgaCACTTACAGGACCCAATCAACGTCTAGGCGCATTGCTCCCACGTTTTCCGAATGTGGAGAAGAGCTGTCTTATCCGACAATCTCTTCCCCTCTGCCTTATCCCGTACCTGATTTTGAATGGTACTTTAACGATGATGAATGCAAATTCTCCACTGCTCAGAGCACTCCTCGTTTCGCCAGGTCCAACGCCCCAGCTAAGCCGGCCAAGAGTGTTTGTGGGGACGCCTTTTTCCGACCATACTCCAATTCCCCAAACTACATGGCTAAAACACAGTCATTCAAGGCAAAACTAAGGTCTCTCAGCGCCCCAAAGCAAAGGCCAGAACCAAAGAAGCAGCTTTCTATCAAAGAAATGATGGCGGCGAGGAACAGCATAAGCGGTGTTAGAATGCAGAGGTCTTCATATTCACAGGTACAGGAATCCTGGAATTTTTG 1154 0.4714 MGKATRWLKGLLGIKTDKQKEYSVNSGSLASDKKVEKKRWSFAKSGKDPDVDQSPVSIATGVSASDNAWLRSYMSETEKEQNKHAIAVAAATAAAADAAVAAAQAAMAVVRLTSHGRGTMFNGGRERWAAVKIQSVFRGFLARKALRALKGLVKIQALVRGFLVRKRAAATLHSMQALIRAQAAVRSQRARRSISNENRFQPEIRSRRSLERFDETRSEFHSKRVSTSHESESPKIVEIDTYRTQSTSRRIAPTFSECGEELSYPTISSPLPYPVPDFEWYFNDDECKFSTAQSTPRFARSNAPAKPAKSVCGDAFFRPYSNSPNYMAKTQSFKAKLRSLSAPKQRPEPKKQLSIKEMMAARNSISGVRMQRSSYSQVQESWNF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02186 384 Pfam IQ calmodulin-binding motif 127 147 IPR000048 GO:0005515
Bva08g02186 384 Pfam IQ calmodulin-binding motif 153 167 IPR000048 GO:0005515
Bva08g02186 384 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 376 - -
Bva08g02186 384 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Bva08g02186 384 PANTHER IQ-DOMAIN 5-RELATED 1 376 - -
Bva08g02186 384 ProSiteProfiles IQ motif profile. 174 203 IPR000048 GO:0005515
Bva08g02186 384 SMART iq_5 148 169 IPR000048 GO:0005515
Bva08g02186 384 SMART iq_5 125 147 IPR000048 GO:0005515
Bva08g02186 384 Pfam Protein of unknown function (DUF4005) 292 376 IPR025064 -
Bva08g02186 384 Gene3D - 68 151 - -
Bva08g02186 384 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02186 Bva-Chr8 14342680 14344778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02186 1 370 IQD Protein Family AT3G16490 56.091 4.62e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02186 - - gmx:100797686 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g02186 08 14342680 14344778 Bva02g02349 02 23035200 23038255 BWGD
Bva08g02186 08 14342680 14344778 Bva08g02186 08 14342680 14344778 ECH