Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g02178 ATGGCTTGCAAATACAGATGCAATTGGCCTTGGAGCTTCATCTTCTGGCTTCTTGTTTTCTCCGTGTTTTCCATTACAGGGAAGTCCACAGTTCTGGCCACACAAATCAGAAGGAAACTACATGATGAAGGAAgttTCATTAGCATTGACTGTGGACTGAGTGAAGAGTCTGGCTATACTGATAACAAAACTCAGATTCATTACACTTCAGATGCAGAGTTCATTGACACTggaacaaacaaaaacatatcaGACAAGTTCATTTCTGAAACTCTTCATAGAACATTTACAAAAGTGAGAAGCTTTCCTGAGGGTAAACGGAATTGCTACACACTAAGACCTCCAGAAGGCAAAGATACTATATACCTGATCAGAGCTTATTTCATGTATGGGAACTACGATAACTTGGATCGGCAACCACAGTTTGATCTTTATGTTGGTGTTAATTCATGGGACACAGTGAAGTTTGAGAATGCCACTCATGTTGTAATGAAGGAGATTTTACATGTGCCATCGATGGATGATGTATATGTTTGCTTGTTAAACACTGATATGGGAACTCCTTTTATATCAGCTTTGGAGCTGAGGCATTTCCACAATTCCAGTTACAGAACACAATCTGGTTCCCTGGCTCTATATAAACGTCTTGACATTGGCTCcacaaccaatgaaatagtcaGGTACAACGAAGATAGTTATGATCGAATTTGGTTTCCTTACAATTTACCTAACTGTTCTGTATTAATGAATACTTCTTTCATCGTTGACTCCCTCAAGAACACAGAATATCGTTTACCATCAATGGTCATGAGAACTGCTCTAACTCCAAAAAACGGTACCGATTCACTAGAACTTGAGTTTGATACCGGAGATCCTACTCTAGAATTCTATGTTTACATGCACTTTGCTGAAGTTGAGAAGCTCAAGGAAAATGAACACCGGGAGTTCAACATTAAATTGAATGGAAACTTGTGGAATGAATCTGTTGTACCTCAGTATTTGCACTCAACTACAATATATAGTAAAAACTCCATCAGGGGAACCAAGCTTACGTTCACTCTGCACAAGAGGTCAAATTCAAGCCTACCTCCTATTCTTAATGCAATGGAGATTTACATTGTCAAAGATTTCTTACACCAACCAACTGACCAAGAAGATGTTAATGCTATTACGGATATCAAATCAAGCTACAGATTGGGTAAATTATGGCAAGGTGATCCTTGTGCACCAATTCACTCTTGGAATGAACTCAGCTGCAGCTACAATGGTTATGATGCACCCAAAATAATCTCATTAAACCTATCCTCCAGTGGATTGACAGGCAAAATAATCCTGTCATTTTCCAAGCTTAAATCAATGCAGTACTTGGATTTATCAAACAATAGCTTGACAGGACCACTGCCAGAATTTTTCTCACAGTTGCCAAACTTGAGGACTATCAATTTATCAGGAAACAGACTCTCAGGTGCAGTTCCTTCGAttctcaaggaaaaaaaaatgaatggatCACTGTCACTGAGTTGGGATGGAAACCCAGATCTTTGTCTGCAGGATCCAtgcaaaaaggaagaaagaaatcttCTTCCAGTAATAGCAGCCATCATTTCATccatatttttgttgattattgTGAGTGTTGTTCTGATAGTTATATGGAGAAGGAGATGCAAGAGAATGCCAGCAGCACAGCAAGCAGTGGGATCATTTGAAGTTATATTGAAATCAAACAACAAACAGTTCACGTACCCTCAGCTAGTGAATATTACCAATAACTTCCAGAAATTGATAGGAAAGGGAGGTTTTGGAACTGTTTATCATGGCTGCTTTAGTGATGGCACTCAAGTTGCTGTCAAGATGCTTTCACTTAAATCACCTCAAGGGTCTAAGCAGTTCCAGACTGAGGCTCAACTCTTAATGCGAGTTCATCATAGGAACCTAGCTGCCTTTCTGGGGTACTGCAACGAAGGTGGATGTTATGCTATCATCTATGAATACATGGCATGTGGAAACTTAAAGGATTATCTCTCAGATTCAAGAAAGGATCCATTGAGTTGGAAACAGAGAATTCAGATAGCAATAGATGCAGCTCAAGGGCTAGAGTACTTGCACAAAGGCTGCAAGCCACCAATAATCCATAGAGACATCAAGACCGCAAATATTTTACTGAACGAGAAACTGCAGGCAAAGGTAGCTGATTTTGGGGTCTCAAAGTTTTTCCCAACTGAAAATGATAGTCATATATCAACTGCTGTTGTTGGCACATTGGGATACCTTGATCCGGAGTACTATATATCTAGCAGGCTGAATGAGAAAAGTGACATTTATAGTTTCGGCATTGTACTTTTAGAGCTAATTACAGGGCAGCCAGCAATAATAAGAAGTCATCAGAACACTCACGTTGTTCAATGGGTTAGCCCCTTTCTTGCAGGAGGAGATATAAGACATATTGTTGATCCAAAGCTACAAGGTGGATTTGATATTGGTTCCATGTGGAAAGCTGTGGAGGTAGCCATAGCTTGTGTACCTCAAGTTTCTGTCCAAAGGCCAGATATGAGCTACGTTGTCACAGAATTAAAAGAGTGCTTAGAAATGGAAGCAGCTTGTGAAGAAATACCAGGTACAGATGACAACATGCTAAAATCAAACAGCTTATTGGAAATGAATATTCTCAATCTTGGAACTGAATCTGGCCCTGAAGCAAGATA 2705 0.383 MACKYRCNWPWSFIFWLLVFSVFSITGKSTVLATQIRRKLHDEGSFISIDCGLSEESGYTDNKTQIHYTSDAEFIDTGTNKNISDKFISETLHRTFTKVRSFPEGKRNCYTLRPPEGKDTIYLIRAYFMYGNYDNLDRQPQFDLYVGVNSWDTVKFENATHVVMKEILHVPSMDDVYVCLLNTDMGTPFISALELRHFHNSSYRTQSGSLALYKRLDIGSTTNEIVRYNEDSYDRIWFPYNLPNCSVLMNTSFIVDSLKNTEYRLPSMVMRTALTPKNGTDSLELEFDTGDPTLEFYVYMHFAEVEKLKENEHREFNIKLNGNLWNESVVPQYLHSTTIYSKNSIRGTKLTFTLHKRSNSSLPPILNAMEIYIVKDFLHQPTDQEDVNAITDIKSSYRLGKLWQGDPCAPIHSWNELSCSYNGYDAPKIISLNLSSSGLTGKIILSFSKLKSMQYLDLSNNSLTGPLPEFFSQLPNLRTINLSGNRLSGAVPSILKEKKMNGSLSLSWDGNPDLCLQDPCKKEERNLLPVIAAIISSIFLLIIVSVVLIVIWRRRCKRMPAQQAVGSFEVILKSNNKQFTYPQLVNITNNFQKLIGKGGFGTVYHGCFSDGTQVAVKMLSLKSPQGSKQFQTEAQLLMRVHHRNLAAFLGYCNEGGCYAIIYEYMACGNLKDYLSDSRKDPLSWKQRIQIAIDAAQGLEYLHKGCKPPIIHRDIKTANILLNEKLQAKVADFGVSKFFPTENDSHISTAVVGTLGYLDPEYYISSRLNEKSDIYSFGIVLLELITGQPAIIRSHQNTHVVQWVSPFLAGGDIRHIVDPKLQGGFDIGSMWKAVEVAIACVPQVSVQRPDMSYVVTELKECLEMEAACEEIPGTDDNMLKSNSLLEMNILNLGTESGPEAR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g02178 900 PIRSF TyrPK_CSF1-R 16 124 - -
Bva08g02178 900 PIRSF TyrPK_CSF1-R 675 787 - -
Bva08g02178 900 PIRSF TyrPK_CSF1-R 513 690 - -
Bva08g02178 900 CDD STKc_IRAK 595 859 - -
Bva08g02178 900 SUPERFAMILY L domain-like 389 496 - -
Bva08g02178 900 ProSitePatterns Protein kinases ATP-binding region signature. 595 617 IPR017441 GO:0005524
Bva08g02178 900 SMART serkin_6 589 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02178 900 ProSiteProfiles Protein kinase domain profile. 589 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g02178 900 PRINTS Leucine-rich repeat signature 453 466 - -
Bva08g02178 900 PRINTS Leucine-rich repeat signature 474 487 - -
Bva08g02178 900 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 28 900 - -
Bva08g02178 900 Pfam Malectin-like domain 49 373 IPR024788 -
Bva08g02178 900 Gene3D Transferase(Phosphotransferase) domain 1 665 879 - -
Bva08g02178 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Bva08g02178 900 Pfam Protein tyrosine and serine/threonine kinase 591 801 IPR001245 GO:0004672|GO:0006468
Bva08g02178 900 Gene3D Phosphorylase Kinase; domain 1 571 664 - -
Bva08g02178 900 Gene3D Ribonuclease Inhibitor 387 511 IPR032675 -
Bva08g02178 900 SUPERFAMILY Protein kinase-like (PK-like) 573 857 IPR011009 -
Bva08g02178 900 PANTHER OS07G0107800 PROTEIN-RELATED 28 900 - -
Bva08g02178 900 Pfam Leucine rich repeat 431 487 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g02178 Bva-Chr8 14306189 14310625 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g02178 12 866 Receptor kinase-like Gene Family AT2G19210 47.575 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva08g02178 Malectin_like 3.4e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g02178 - - aprc:113853796 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02336 02 22972186 22976296 Bva08g02178 08 14306189 14310625 BWGD
Bva08g02178 08 14306189 14310625 Bva08g02178 08 14306189 14310625 ECH